Providencia zhejiangensis: ACE2AM_08745
Help
Entry
ACE2AM_08745 CDS
T10958
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pzn Providencia zhejiangensis
Pathway
pzn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pzn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACE2AM_08745 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzn03400
]
ACE2AM_08745 (mfd)
Enzymes [BR:
pzn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACE2AM_08745 (mfd)
DNA repair and recombination proteins [BR:
pzn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ACE2AM_08745 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFD_D3
DEAD
TRCF
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
UB2H
Cas3-like_C_2
ERCC3_RAD25_C
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
XGY79650
LinkDB
All DBs
Position
complement(1988136..1991579)
Genome browser
AA seq
1147 aa
AA seq
DB search
MSAKFRYELPTRGGDVRHLGCLIGAAGALECGEMIERHQGPVVIITRDMQNTLRLRDEIQ
QFTQLPIEILSDWETLPYDNFSPHQEIISHRLSTLYRLPTMQKGVLILPVNTLMQKVCPA
EFLTSHALVMAKGDKLSRDSLRDELDKAGYRHVEQVLEHGEYATRGALLDLFPMGSTLPY
RIDFFDDEIDSLRTFDVDSQRTLEEVARINLLPAHEFPTDKEAIERFRSQWRERFEVRRD
PEHIYQQVSKKTLPTGIEYWQPLFFSQPLPSLFDYLPANTLFISQHYQEAAERFQTDTQQ
RFESRGVDPMRPLLPPTDLWLTVEQLNQALKQWPRVQLSVEKLADKAANTNLDYQPLPDI
STQGQSKQPLEKLRQFIEHFDGTVVFSVESEGRRETVTELLGRIKIRPEIINRYTSPSDS
RFAIMVGAAEHGFIQPQQHRALICESDLLGERVVRRRTDNRRTINTDTLIRNLAELRPGQ
PVVHIEHGVGRYQGLTTLEAGGIKAEYLILTYAGNDKLYVPVSSLHLISRYSGGADENAP
LHRLGSDSWGRARQKAAEKVRDVAAELLDIYAQRAAKPGFAFKHDKEQYQEFCQGFPFET
TPDQELAINAVLSDMCQPIAMDRLVCGDVGFGKTEVAMRAAFLAINNNKQVAVLVPTTLL
AQQHFDNFRDRFANWPIRIEMLSRFKTAKEQQQIIEETAEGKIDILIGTHKLLQSDIVWH
DLGLLVVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPA
RRLAVKTFVRQYDDLVVREAILRETLRGGQVYYLYNDVENIEKAKKRLEELVPEARFVVG
HGQMRERELERVMSDFHHQRFNVLICTTIIETGIDIPTANTIIIERADHFGLAQLHQLRG
RVGRSHHQAYAYLLTPHPKAMTTDAHKRLEAISSLEDLGAGFALATHDLEIRGAGELLGE
EQSGQMTTIGFTLYMELLENAVDALKDGREPSLEDLVNQQTEVELRMPVLLPDDYIHDVN
IRLSFYKRIASASDERELSELRTELVDRFGMLPDAGRFLLASAAIRLEAEKLGIKRIEAH
EQGGFIEFGEKNKVSPNFLISLLQNQPKTFRLDGPVRLKFVHDLNDRHARIEFIKQLLND
FADNLID
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaatttcgttatgaactccctacgcgcggtggtgatgtccgtcatctagga
tgcttgattggggccgctggtgcgcttgaatgtggagagatgatagagcgtcatcaaggg
cctgtggtcatcatcacaagagatatgcagaacacactgcgcctacgcgatgaaattcaa
caatttacccaactaccgatagaaatactttctgattgggaaacattaccctacgataat
ttttcaccacaccaagaaattatctctcaccgtttatcaaccttatatcgcctaccgaca
atgcaaaaaggcgtgttgatcctgcccgtcaacaccttaatgcaaaaggtatgccctgct
gaatttttaactagtcacgcgctagtcatggcgaaaggcgataaactttcacgtgatagc
ttgcgtgatgaacttgataaagcaggttatcgtcacgttgaacaggttttagagcatggg
gaatatgcaactcgaggcgcgttactcgatttattcccaatgggtagcactttaccgtat
cgaattgacttttttgatgatgaaattgatagcttacggacttttgatgtcgatagccaa
cgaacccttgaagaagtagcacgcatcaatttattacccgcacacgaatttcctaccgat
aaagaggctattgagcgttttcgcagccaatggcgcgaacgttttgaagttagacgcgat
cctgagcatatttatcaacaggtaagtaagaaaacgttgcctaccggtattgaatactgg
caacccctatttttcagtcaaccgctaccctctctatttgactacttgcctgctaacaca
ctttttatttcgcaacattatcaagaagcagcagaacgtttccaaacagatacccagcag
cgtttcgaaagccgcggtgtcgaccccatgcgtcctctgctaccgccaaccgatttatgg
ctcactgtcgaacaacttaaccaagcattaaaacaatggcctcgagttcaactttcggtt
gagaaattagcggataaagcagcgaataccaatttagactatcaacctttacccgacatt
agtactcaagggcaaagcaagcaaccattggaaaagctccgtcaatttattgaacatttt
gatggaaccgtggttttctctgttgaaagtgaaggtcgacgtgaaacggtgactgaacta
ttaggtcgcataaaaattcgccctgaaattattaaccgttataccagtccatccgacagc
cgttttgctattatggtcggcgccgctgaacatggctttattcagcctcagcagcaccgc
gctttaatttgtgaaagtgacttacttggggaacgtgttgttcggcgccgtacggataac
cgtcgaacgatcaacaccgatacgctcattcgcaacttagccgaattacgtcctggtcaa
cccgttgtacacattgaacatggcgttggacgttatcaaggtttgaccaccttagaagcc
ggtggcattaaagctgaatatttgatcctgacctatgcaggtaacgataagctatatgta
cctgtttcctctttacatcttattagccgttattctggcggtgcagatgaaaatgcacct
ctccatcgtcttggcagtgatagttggggcagagcccgtcaaaaagcggcagagaaagta
cgtgatgtggcagcagaactactcgatatttatgcgcaacgtgcagccaagcctggcttt
gcatttaagcacgataaagagcaataccaagagttttgtcaaggcttcccctttgaaacg
acgcccgaccaagaattggctatcaatgccgtccttagcgatatgtgccaacctatcgcc
atggatcgtctagtgtgtggtgatgttggttttggtaaaaccgaagtggctatgcgcgcg
gcctttttagctatcaacaacaataaacaagtagcggtacttgtaccaaccaccctactt
gctcagcaacatttcgataatttccgcgaccgtttcgcaaattggccaataagaatcgaa
atgctttcccgtttcaaaacggcaaaagaacagcagcaaattattgaggaaactgcggaa
gggaaaattgatattctgatcggtacgcataaattgctacaaagcgacatcgtctggcat
gacttaggcttacttgtggtggatgaggagcaccgttttggtgttcgtcataaagaacgt
atcaaggcgatgcgtgcagatgtcgatattttaacattaaccgcaacaccgattcctcgt
acattgaatatggcaatgagtggtatgcgagacttatcgattattgcgacaccgccagct
cgccgtttagccgtcaaaacctttgtgcgtcagtatgatgacctggttgttcgtgaagcg
attttgcgtgaaacattacgtggtggacaagtctactatttatacaatgatgtcgaaaat
attgaaaaagccaaaaaacgccttgaagaattggttccagaagcgcgctttgtggttggc
cacggtcaaatgcgcgaacgtgagcttgaacgcgtgatgagtgatttccaccatcaacgt
ttcaatgtcttaatttgtactacgatcattgaaacaggtatcgatattccaacggcaaat
acaatcattatcgagcgtgctgatcactttggactagcacagctgcaccaattacgtggt
cgtgtaggtcgttctcaccaccaagcttacgcttatttgttgaccccgcatcctaaagcc
atgacaactgatgcccataagcgtttagaggcaatctcttcacttgaagatctcggcgct
ggtttcgcactagcaactcatgatcttgaaattcgaggagccggtgaattacttggtgaa
gagcaaagcggccaaatgaccacaatcggttttacactgtacatggagttattagagaat
gcggtagatgcattaaaagacggacgagagccttcattggaagatctcgtgaatcagcaa
acggaagtcgaattacgcatgcccgtgctactgcctgatgattacattcatgatgtcaat
attcgcttatcattctataaacgtatagcaagtgcgagtgatgaaagggagttaagcgag
ctgcgtacagagttagtggaccgttttggcatgttacccgatgctgggcgctttttactg
gcgagtgcagccattaggcttgaagcagaaaaattgggtattaagcgtatagaagctcat
gagcaaggtggatttattgaatttggcgagaaaaataaagtgtcgccaaacttcttaatc
agtttattacagaatcaacctaaaacgttccgcctcgatgggcctgtgagactcaaattt
gttcacgatttaaatgatagacatgctcgtattgaatttatcaaacagttattaaatgac
tttgcggataacttaatcgattaa
DBGET
integrated database retrieval system
