Providencia zhejiangensis: ACE2AM_14085
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Entry
ACE2AM_14085 CDS
T10958
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pzn Providencia zhejiangensis
Pathway
pzn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE2AM_14085 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzn03019
]
ACE2AM_14085 (rhlE)
Enzymes [BR:
pzn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACE2AM_14085 (rhlE)
Messenger RNA biogenesis [BR:
pzn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE2AM_14085 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
UTP25_NTPase-like
NAD_binding_3
Cullin_binding
Motif
Other DBs
NCBI-ProteinID:
XGY77052
LinkDB
All DBs
Position
complement(3169290..3170627)
Genome browser
AA seq
445 aa
AA seq
DB search
MTSFSDLALNEEILLAINELGYESPTPIQQQAIPAVLAGHDLLASAQTGTGKTAGFTLPI
LQKLISTPRTGKDRKPIRALILTPTRELAAQVAENVKEYSRHLKVRSFVVFGGVSINPQM
MKLRGGVEILIATPGRLLDLEHQNAVNLSQVEIFVLDEADRMLDMGFIHDIRRVINKLPK
KRQNLLFSATFSDEIKQLANKLLDNPITIEVAPRNSASEQVTQFVHHVDKKRKAELLSYM
IGRDNWQQVLVFTRTKHGANRLAEHLNKDGIKAAAIHGNKSQGARTRALADFKSGDIRVL
VATDIAARGLDIEQLPYVVNFELPNVAEDYVHRIGRTGRAEATGMAVSLVCVDEVKLLKD
IEKLLKKSIPVMAIDGYEPDPSIKPEPIQKGPQRNNERRSGSGKRHTTSAKPRRERTENT
KSKPATSGSPWKKSQKKVRQGHGEG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgactagtttttcagacctcgcattaaacgaggaaattctgcttgccatcaatgagtta
ggctatgaatcaccgacgccaattcagcagcaagctatcccggcagttcttgctggccat
gacttattagcaagcgcccagacaggaacgggaaaaaccgcgggctttacgttacctatt
ttgcagaaattgatctccactccccgcacagggaaagatcgtaaacccattcgagcatta
attttgacgcctacccgtgaattggctgctcaagttgctgaaaatgttaaagaatatagc
cgccatttgaaggttcgctcctttgtggtctttgggggggtcagcattaaccctcaaatg
atgaaattacgtggtggtgttgaaatcttgattgcgacacccggacgtttactcgattta
gaacatcaaaatgcggttaatttatcccaagttgaaatttttgttcttgatgaagctgac
cgcatgttggatatgggatttattcatgatattcgccgtgttatcaataaattgcctaag
aaacgccaaaatttgctgttttcagcgacgttctctgatgaaattaaacagctagcgaat
aagctattagataacccaattactattgaagtcgctccccgtaattcagcctctgaacaa
gtcacccaatttgtgcatcatgttgataaaaaacgtaaagcggaacttttatcctacatg
atcggtcgtgataattggcaacaggtgctcgtgtttacgcgtacaaaacatggcgcgaac
cgacttgctgagcatcttaataaagatggaataaaagccgctgcaatccatggaaacaaa
agccaaggtgcacgtacacgcgccctagcagactttaaatcaggtgacatacgtgtctta
gtggctacagacattgctgcgcgtggtttggatatcgaacagcttccttacgtcgttaac
ttcgaactgcctaatgtggcggaagactatgttcaccgtattggtcgtacaggacgagca
gaagcaacgggaatggcggtatcactagtttgtgtggatgaagttaagttattaaaagat
atagaaaaattattgaaaaaatccatccccgttatggcgattgatggttatgagcccgac
ccttcaattaagcctgaacctattcagaaaggccctcagcgcaataatgagagacgtagc
ggtagcggtaagcgccataccacgtctgcgaagcctcgccgtgaacgcaccgagaatacg
aaaagtaagccggcaacttctggttcaccgtggaaaaaatcacaaaagaaagtgcgtcag
gggcatggtgaaggttaa
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