Providencia zhejiangensis: ACE2AM_15770
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Entry
ACE2AM_15770 CDS
T10958
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pzn Providencia zhejiangensis
Pathway
pzn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pzn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACE2AM_15770 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pzn03021
]
ACE2AM_15770 (rpoD)
Transcription machinery [BR:
pzn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACE2AM_15770 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DMP1
Eclosion
D27-like_C
TMEM120A-B
Motif
Other DBs
NCBI-ProteinID:
XGY79943
LinkDB
All DBs
Position
3505414..3507324
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AA seq
636 aa
AA seq
DB search
MVSPTDTNLNTQKCGYRLMEQNPQSQLKLLVTKGKEQGYLTYAEVNDHLPEDIVDSDQIE
DIIQMINDMGIQVMEEAPDADDLILAETTSDTDEDAAEAAAQVLSSVESEIGRTTDPVRM
YMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDLVEAGESRLSD
LITGFVDPNAEEDLAPTATHVGSELPQEELDKDDDEDDDEDEDGDDSDSDDDNSIDPELA
REKFGELRTQYEKTRQHIKQFGRSNAQTALAIEELSEVFKQFRLVPKQFDYLVNNMREMM
DRVRFQERTIMKLCVEQCKMPKKNFITLFSGNETSETWLTAAKAMNKPWCEKLLEVEEEI
LRCLQRLRQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNR
GLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMI
ETINKLNRISRQMLQEMGREPSPEELAERMMMPEDKIRKVLKIAKEPISMETPIGDDEDS
HLGDFIEDNTLELPLDSATSESLRSATHEVLAGLTAREAKVLRMRFGIDMNTDHTLEEVG
KQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
attgtttcgccgaccgacaccaatctaaatactcagaagtgtggataccgtcttatggag
caaaacccgcagtcgcagcttaagctactcgtaaccaagggtaaggagcaaggttactta
acctatgctgaggtcaacgaccatctgccggaagatatcgtcgattcagatcagattgaa
gatatcatccagatgattaatgacatgggcatccaggtcatggaagaagcacctgacgcc
gatgatttgatactcgctgaaaccacttccgatacggatgaagatgcagcagaagccgct
gctcaagttctatccagtgtggaaagtgaaattggtcgtactacagaccctgtgcgcatg
tacatgcgtgaaatgggtaccgtcgaactcttaacccgtgaaggtgagatcgacatagca
aaacgtatcgaagatggcatcaaccaagttcagtgctctgttgcagagtaccctgaagcc
attacttatctactcgaacagtatgacctcgttgaagcaggcgaaagccgcttatccgat
ttgattactggtttcgtcgatcctaacgctgaagaagatttagcaccaaccgcaacacac
gttggttctgagcttccacaagaagagttggataaagacgatgatgaagatgatgatgaa
gacgaagacggcgatgacagcgatagcgatgatgataacagcatcgatcctgaactagcc
cgtgaaaaattcggtgaattgcgtacgcaatacgaaaaaacgcgtcagcacattaagcag
tttggtcgtagcaatgcacaaacagcacttgctatcgaagaactttctgaagtcttcaag
caattccgtttagtgcctaagcaatttgactatctggtcaataacatgcgtgaaatgatg
gatcgcgttcgtttccaagaacgtactatcatgaagctatgtgttgaacagtgcaaaatg
cctaagaaaaacttcatcacgttattcagtggcaatgaaaccagtgaaacttggttaaca
gcagccaaagcgatgaacaagccttggtgtgaaaagctgctagaagttgaagaagaaatt
ttgcgttgtctgcaaagattacgtcaaattgaagaagaaactggcctgacaattgaacag
gtaaaagatattaaccgtcgtatgtctatcggtgaagcgaaagcacgccgtgcgaaaaaa
gagatggttgaagcaaacttacgtctggtaatttctatcgcgaagaaatataccaaccgt
ggtttgcaattccttgacctaatccaagaaggtaatattggtctgatgaaagcggttgat
aaatttgaatatcgccgtggttataaattctcgacctatgcaacttggtggatccgtcag
gcaattacacgttctatcgcggatcaggctcgtaccattcgtattccggtacatatgatt
gaaaccatcaacaaactgaaccgtatctctcgtcagatgctacaggaaatgggccgtgaa
ccttcccctgaagagttagcggaacgtatgatgatgccggaagacaagatccgtaaagtc
ctgaagatcgctaaagagccaatctcaatggaaacgccaatcggtgatgatgaagattca
catctcggcgactttattgaagataacacgttagagctaccattagactcagcgacatca
gaaagtctgcgttcagcaactcatgaagtgctggcaggtctgacggctcgtgaagcaaaa
gttctacgtatgcgttttggtatcgatatgaacaccgaccataccttagaagaggtgggt
aaacagttcgacgttacgcgtgagcgtattcgtcaaatcgaggctaaagctctacgtaaa
ttgcgtcatccaagccgctctgaagttctacgtagcttccttgacgaataa
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