Phenylobacterium zucineum: PHZ_c1134
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Entry
PHZ_c1134 CDS
T00750
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pzu
Phenylobacterium zucineum
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzu03032
]
PHZ_c1134
03400 DNA repair and recombination proteins [BR:
pzu03400
]
PHZ_c1134
Enzymes [BR:
pzu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PHZ_c1134
DNA replication proteins [BR:
pzu03032
]
Prokaryotic type
DNA Topoisomerases
PHZ_c1134
DNA repair and recombination proteins [BR:
pzu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PHZ_c1134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACG77548
UniProt:
B4R815
LinkDB
All DBs
Position
complement(1298634..1299710)
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AA seq
358 aa
AA seq
DB search
MPNDVAAAEHIEEAGLRYVSDGDPGIARKPARGHGFNYLAPNGEPVTDEKTLDRIRALAI
PPAWTDVWICPRANGHIQAVGRDQKGRKQYRYHARWREVRDSHKYDRVLAFGRALPRLRR
RVEEDLKRPGLPREKVLAAVIRVMETTLIRVGNEEYAKQNRSFGLTTLRDRHVKVGRAGA
VFEFRGKSGKVHKTGLNDRRLARIVKACQDLPGQRLFQYVGDDGLQHAVESADVNAYLRD
ALGEDFSAKDFRTWAGTVMAARALMETPACASAAEAKRNVSTCVKAVAGVLGNTAAVARS
AYIHPAVLEAYQDGALEVKASGSDERAFELAVLRFLEGVRDDDPQKKTAAAREMARKA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacgacgtcgcggccgccgaacacatcgaggaggccgggctcaggtacgtgagc
gacggcgatccgggcatcgcgcgcaagcccgcgcggggccacggcttcaactacctcgcg
ccgaacggcgagccggtcaccgacgagaagaccctggatcgcatccgcgcgctggccatc
ccgccggcctggaccgacgtctggatctgcccccgcgccaacggccacatccaggcggtg
ggccgcgaccagaagggccgcaagcagtaccgctatcacgcccgctggcgcgaggtgcgc
gacagccacaagtacgaccgggtgctcgccttcggccgcgccctgccccgacttcggcgg
cgggtggaggaggacctgaagcgtccgggcctgccgcgcgagaaggtgctggccgccgtc
atccgggtgatggagaccaccctgatccgggtcggaaacgaggaatacgccaagcagaac
cgcagcttcggcctgaccaccctgcgcgaccggcatgtgaaggtcggccgcgccggcgcc
gtcttcgagttccgcggcaagagcggcaaggtccacaagaccggcctgaacgaccgccgg
ctcgcccgtatcgtcaaggcctgccaggacctgccgggccagcggctgtttcagtacgtc
ggcgacgacgggctgcagcacgcggtggagtccgccgacgtcaacgcctacctgcgcgac
gcgctgggcgaggacttctcggccaaggacttccgcacctgggccgggaccgtcatggcc
gcccgcgcgctgatggagacgccggcctgcgccagcgccgccgaagccaagcgcaatgtc
tccacctgcgtgaaggcggtggccggcgtgctgggcaacacggccgcggtggcccgcagc
gcctacatccaccccgcggtgctcgaggcctatcaggacggcgcgctggaggtgaaggcc
tcggggagcgacgagcgggccttcgagctggccgtcctgcggttcctggaaggcgtgcgc
gacgacgacccgcagaagaagaccgccgccgcgcgggagatggcccgcaaggcctga
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