Phenylobacterium zucineum: PHZ_c1254
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Entry
PHZ_c1254 CDS
T00750
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pzu
Phenylobacterium zucineum
Pathway
pzu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PHZ_c1254 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pzu03021
]
PHZ_c1254 (rpoA)
03400 DNA repair and recombination proteins [BR:
pzu03400
]
PHZ_c1254 (rpoA)
Enzymes [BR:
pzu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PHZ_c1254 (rpoA)
Transcription machinery [BR:
pzu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PHZ_c1254 (rpoA)
DNA repair and recombination proteins [BR:
pzu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PHZ_c1254 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
ACG77668
UniProt:
B4R8P1
LinkDB
All DBs
Position
1431997..1433013
Genome browser
AA seq
338 aa
AA seq
DB search
MIERNWNELIRPEKPQIETGADASRKARLVAEPLERGFGVTLGNSLRRVLLSSLQGAAVT
AVQIDGVVHEFSSLEGVREDVVDIVLNIKQLALRMHAEGPKRMTLRATGPGAVTASQIEA
PADIEILNGDHVLCTLDDGASVRMEFTVQTGKGYVPAEMNRPEDAPIGLIAVDSLFSPVK
RVAYRVEPTRQGQSLDYDKLIMEVETNGAVSPVDAVAYAARILQDQLQIFITFEEPKKKV
EGEAKPELPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLAGMGLHLGMDVPNWPPENIEELAKKFEDQM
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaaagaaactggaacgagcttatccgtcccgagaagccgcagatcgagaccggc
gccgacgcgagccgcaaggcccgtctggtggccgagccgctcgagcgcggtttcggcgtg
acgctgggcaacagcctgcgccgcgtccttctctcctccctgcagggcgcggcggtgacc
gcggtgcagatcgacggcgtcgtccacgagttctcgtcgctggaaggcgtgcgtgaggac
gtcgtcgacatcgtcctgaacatcaagcaactggcgctgcggatgcacgccgagggcccc
aagcgcatgaccctgcgcgccaccggccccggcgcggtgaccgccagccagatcgaagcg
cctgcggacatcgagatcctcaacggcgaccacgtgctctgcacgctggacgacggcgcc
tcggtgcgcatggagttcacggtccagaccggcaagggctacgtcccggccgagatgaac
cgtcccgaggacgccccgatcggcctgatcgccgtcgattccctgttctcgccggtcaag
cgcgtcgcctaccgcgtcgagccgacccgccagggccagagcctcgactacgacaagctg
atcatggaagtggagaccaacggcgccgtgtcgccggtggacgcggtggcctacgccgcc
cgcatcctccaggaccagctgcagatcttcatcaccttcgaagagccgaagaagaaggtc
gagggcgaggccaagccggaactgccgttcaacccggcgctgctgaagaaggtggacgag
ctcgagctctccgtccgttcggccaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaagacggaagccgagatgctgcgcacgccgaacttcggccggaagtct
ctgaacgagatcaaggaagtgctcgccggcatgggcctccacctcggcatggacgtgccg
aactggccgccggagaacatcgaagagctggcgaagaagttcgaagaccagatgtag
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