Phenylobacterium zucineum: PHZ_c1317
Help
Entry
PHZ_c1317 CDS
T00750
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pzu
Phenylobacterium zucineum
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzu03032
]
PHZ_c1317 (topA)
03400 DNA repair and recombination proteins [BR:
pzu03400
]
PHZ_c1317 (topA)
Enzymes [BR:
pzu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PHZ_c1317 (topA)
DNA replication proteins [BR:
pzu03032
]
Prokaryotic type
DNA Topoisomerases
PHZ_c1317 (topA)
DNA repair and recombination proteins [BR:
pzu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PHZ_c1317 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
KARI_N
Motif
Other DBs
NCBI-ProteinID:
ACG77731
UniProt:
B4R961
LinkDB
All DBs
Position
complement(1494464..1497100)
Genome browser
AA seq
878 aa
AA seq
DB search
MNVVIVESPAKAKTINKYLGSDYKVLASYGHVRDLPAKDGSVRPDEDFAMSWDVDAKAAK
RLSEIAEAAKGADRVILATDPDREGEAISWHVLEVLQKKRALKDAKVQRVVFNAITKSAV
TEAMANPRELDMELVEAYLARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLIVDR
ELEIERFRTQEYWTVEAEVAAGGDPFTARLVKHEGKRLSKFDLGNEASAFAARDAVKAAT
FKVAAVERKPGRRSPPPPFTTSTLQQEAARKLGFSAQRTMQAAQKLYEGVDIGGETVGLI
TYMRTDGVQTAPEALDEARAVIGGLYGKDYVPEKPRFYSTKAKNAQEAHEAIRPTSLGRN
PGKLRLEGDLGRLYELIWKRMIASQMESARIERTTIDLESADGRTGLRATGQVVTFPGYL
AVYEEGRDDPEDEEGGRLPQVAEGAQATVRQAKADQHFTEPPPRYSEASLVKKMEELGIG
RPSTYASILERLRDRSYVRMEKQRFVPEDQGRIVTIFLEEFFGKYVEYDFTADLEDQLDQ
VSAGDLDWKVLLKNFWADFNAKVGELGQIGTREVIDALDESLASTLFPPMADGSDPRVCP
RCGSGRLSLKPSRTGAFIGCSNYPECRFTRPFGPPDAEGAEASGDRDLGTDPQTGETVWL
KAGRFGPYVQLGEGEKPKRSSLPKGWSVADMDLEKALRLLRLPREIGPHPEDGKPILAGI
GRYGPFVQHNGTYANLPSVDEVFEVGLNRAVDLIATKRAGGKRGGEAEALKDLGAHPADG
QPVRVLAGRYGPYVKHGSTNATIPKGADPKALTLDEAVKLLAEREAKGGGKKKPARKAKA
EPKAKKAPAKKAPAKKAAAKTPAKATPAGDIDDDESPF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgtcatcgtcgagagcccggccaaggccaagaccatcaacaagtacctgggc
tcggactacaaggtgctcgcctcctacggccacgtccgcgacctgcccgcgaaggacggt
tcggtgcgccccgacgaggacttcgccatgtcctgggacgtggacgccaaggccgccaag
cgcctgtccgagatcgccgaggccgccaagggcgccgaccgcgtgatcctggccaccgac
cccgaccgcgagggcgaggccatcagctggcacgtgctggaggtgctgcagaagaagcgc
gcgctgaaggacgccaaggtccagcgcgtggtgttcaacgccatcaccaagtcggccgtc
accgaggccatggccaacccgcgcgagctcgacatggagctggtggaggcctacctggcc
cgccgcgccctcgactacctggtgggcttcacgctctcgccggtgctgtggcgcaagctg
ccgggcgccaagtcggccggccgggtgcagtcggtcgccctgcggctgatcgtcgaccgc
gagctcgagatcgagcggttcaggacgcaggaatactggaccgtcgaagccgaggtggcc
gccggcggcgatcccttcaccgcccggctggtgaagcacgagggcaagcggctctcgaag
ttcgacctcggcaacgaggccagcgccttcgccgcccgcgacgccgtcaaggccgcgacg
ttcaaggtcgccgccgtcgagcgcaagcccggccggcgctcgcccccgcccccgttcacc
acctcgaccctgcagcaggaggccgcccgcaagctcggcttctcggcccagcggaccatg
caggccgcccagaagctgtacgaaggcgtcgacatcgggggcgagacggtcggcctcatc
acctacatgcggaccgacggcgtgcagaccgcgcccgaggcgctggacgaggcgcgcgcc
gtgatcggcgggctctacggcaaggactacgtccccgagaagccgcgcttctactccacc
aaggccaagaacgcgcaggaggcccacgaggcgatccgcccgaccagcctcggccgcaat
cccggcaagctgcgcctggagggcgacctcggccggctctacgagctgatctggaagcgg
atgatcgcctcgcagatggagtccgcccgcatcgagcgcaccaccatcgacttggagagc
gccgacggccgcaccggcctgcgcgccaccggccaggtggtgacgttccccggctacctc
gccgtctacgaagagggccgcgacgatcctgaggatgaagaaggcgggcgcctgccgcag
gtggcggagggcgcccaggcgaccgtccgccaggcgaaggccgaccagcacttcaccgag
ccgccgccgcgctactcggaagccagcctggtgaagaagatggaggagctgggcatcggc
cggccctccacctacgcctcgatcctggagcgtctgcgcgaccggtcctacgtgcggatg
gagaagcagcggttcgtgcccgaggaccagggccggatcgtcacgatcttcctcgaggag
ttcttcggcaagtacgtcgagtacgacttcacggcggacctcgaggaccagctggaccag
gtgtcggccggcgacctcgactggaaggtgctgctcaagaacttctgggccgatttcaac
gccaaggtcggcgagttgggccagatcggcacccgcgaggtcatcgacgccctcgacgag
agcctggcctcgacgctgttcccgccaatggccgacggttcggacccccgcgtctgcccg
cgctgcggcagcggccggctcagcctgaagcccagccggaccggcgccttcatcggctgc
tcgaactatcccgagtgccgcttcacccgccccttcggcccgccggacgccgagggcgcc
gaggccagcggcgaccgcgacctggggaccgatccccagacgggcgagaccgtctggctg
aaggccggccgcttcggcccctacgtgcagctcggcgagggcgagaagcccaagcggtcc
agcctgcctaagggctggagcgtggccgacatggacctggaaaaggcgcttcgcctgctg
cgcctgccgcgcgagatcggcccgcacccggaggacggcaagccgatcctggccggcatc
ggccggtacggccccttcgtccagcacaacggcacctacgcgaacctgcccagcgtggac
gaggtgttcgaggtgggcctcaaccgcgccgtcgacctgatcgccaccaagcgcgccggc
ggcaagcgcggcggcgaggccgaggcgctgaaggacctgggcgcccaccccgccgacgga
cagccggtgcgcgtgctggccggccgctacggcccgtatgtgaagcatggctccaccaac
gccacgatcccgaagggcgccgatcccaaggcgctgaccctggacgaggcggtgaagctg
ctggccgagcgcgaggccaagggcggcggcaagaagaagcccgcccgcaaggccaaggcg
gagccgaaggccaagaaggcgccggcgaagaaagctccggcgaagaaggcggctgcgaag
acgcccgccaaggcgacgccggctggcgatatcgacgacgacgagtcgccgttctga
DBGET
integrated database retrieval system
