Phenylobacterium zucineum: PHZ_c1692
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Entry
PHZ_c1692 CDS
T00750
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pzu
Phenylobacterium zucineum
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pzu03016
]
PHZ_c1692
Enzymes [BR:
pzu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PHZ_c1692
Transfer RNA biogenesis [BR:
pzu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PHZ_c1692
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACG78103
UniProt:
B4RBQ6
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All DBs
Position
complement(1896963..1898141)
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AA seq
392 aa
AA seq
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MTPITTTAELEAFCAKLKGQPFVAVDTEFMRETTYWPKLCLIQAAAPSAEAVIDPLADDI
DLSCFLDILRDESIQKVFHAARQDVEIFNNLGAMPKPLFDTQVAGMAAGFGEQIAYDALV
RQMLKIEIDKSSRFTDWARRPLSDSQLTYALADVTHLAKLYPLLRQRLEREGRLAWVTDE
MNDLTDPANYDVEPENAWKRLRPRRHTAKYLAVYRAVAAWRERTAQLRDQPRGRILKDDA
IDEIATQTPTDADALDRLRSVPKGFSGSRFGPDLLAAVREALKDPEGYAPVIEKTRQPAS
PAAGAVVELLKVLLKARAEEAGVASKLIATVADLEQIANNDNADTAALKGWRREAFGEDA
LKLKRGELALVLDGARVRVVEVRRAPKAASAG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccatcacaaccaccgcggaacttgaagcgttctgcgccaagctcaagggtcag
cctttcgtcgccgtggacaccgagttcatgcgcgagacgacctactggcccaagctttgc
ctgatccaggccgcagccccctccgcggaagccgtcatcgaccccctggccgacgacatc
gacctctcgtgcttcctcgacatcctgcgcgacgagagcatccagaaggtgttccacgcc
gcccggcaggacgtggaaatcttcaacaacctcggcgccatgccgaagccgctgttcgac
acccaggtggcgggcatggcggcgggcttcggtgaacagatcgcctacgacgccctcgtg
cggcagatgctgaagatcgagatcgacaagtccagccggttcaccgactgggcgcgccgg
ccgctctcggacagccagctgacctacgccctggccgacgtgacgcacctggccaagctc
taccccctgctgcgccagcggctggagcgggaggggcggctggcctgggtcaccgacgag
atgaacgacctcacggacccggcgaactacgacgtcgagcccgagaacgcctggaagcgg
ctgcgcccgcgccggcacacggccaagtacctggcggtctaccgtgccgtcgccgcctgg
cgcgagcggaccgcccagctgcgcgaccagccgcgcggccggatcctgaaggacgacgcg
atcgacgagatcgccacgcagactccgaccgacgccgacgcgctggaccggctgcgctcg
gtgcccaaggggttctcggggtcgcggttcgggcccgacctcctggccgccgtccgcgag
gcgctgaaggacccggaaggctacgcccccgtgatcgagaagacccgccagccggcctcg
ccggccgccggcgcggtcgtcgagctcctgaaggtgctgctgaaggcgcgggccgaggag
gcgggcgtggcctcgaagctgatcgccaccgtcgccgacctggagcagatcgccaacaac
gacaacgccgacaccgcggccctcaagggttggcggcgcgaggccttcggcgaggacgcc
ctgaagctgaagcgcggcgagctggccctggtgctggacggcgcgcgggtgcgcgtggtg
gaagttcgccgcgcgccgaaggccgcctcggcgggctga
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