Phenylobacterium zucineum: PHZ_c1782
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Entry
PHZ_c1782 CDS
T00750
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pzu
Phenylobacterium zucineum
Pathway
pzu03030
DNA replication
pzu03430
Mismatch repair
pzu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHZ_c1782 (dnaE)
03430 Mismatch repair
PHZ_c1782 (dnaE)
03440 Homologous recombination
PHZ_c1782 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzu03032
]
PHZ_c1782 (dnaE)
03400 DNA repair and recombination proteins [BR:
pzu03400
]
PHZ_c1782 (dnaE)
Enzymes [BR:
pzu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PHZ_c1782 (dnaE)
DNA replication proteins [BR:
pzu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PHZ_c1782 (dnaE)
DNA repair and recombination proteins [BR:
pzu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PHZ_c1782 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
ACG78193
UniProt:
B4RBZ6
LinkDB
All DBs
Position
complement(1992375..1995821)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSGEGPATADAGFVHLRVRSAYSLLEGAIKADKIGDLAKAWGMPAVALADRANLFGALEF
SVATKGSGVQPIIGCALPVSGIGDRPPERWAKTPTIMLLAQSEQGYLNLCELSSAAYLDV
DASEEPHVPWTKVVERSEGLILLSGGPDGPVDHLFAAGKVKEGRAALAEMKRAFGSRFYV
ELQRHGLPAEAAAEGELVAFAYDEDVPLVATNDVYFKNPQMHQAHDALLCIADGSFVGQD
ERRRVTAEHWFKSPADMRALFADLPEACDNTLDIARRCAFMVHKRDPLLPSFTDEGRSEA
EELAHQAREGLRARMAAGQANAFPAEEYEARLEREIQVITQMGFPGYFLIVSDFIKWAKA
RGIPVGPGRGSGAGSLVAYALTITNLDPLRYGLLFERFLNPERVSMPDFDIDFCQERREE
VINYVQQRYGRDKVAQIITFGTLQARAVLRDVGRVMQLPLGQVDRLAKMVPANPANPVTL
AQALDIEPRLKEEAARDEAVARLLDVALQLEGLYRNASTHAAGVVIGDRPLTQLTPLYRD
PRSELPATQFNMKWVESAGLVKFDFLGLKTLTVIDRAVKHLEKRGAAVDMNALPLDDGPT
YELMSNAQTIGVFQLEGQGMRDTLRQLRPSSIEDVTAIVSLYRPGPMDNIPAFVDCKFGR
KPIDTLHPLLEGVLKETYGIIVYQEQVMQIAQILAGYSLGEADLLRRAMGKKKKEEMEAQ
RARFVSGAEAKGVPAAQSGAIFDLVDKFAGYGFNKSHAAAYAVVSYQTAWLKANAPVEFF
AASMSLDIANTDKLSVFYQDAKRFGVKIRPPCVNRSGADFEVENGEVLYALGAIRNVGLQ
AMEHVVQVRREGGPFRDIFDFVERIDPKQVNKRTFETLARAGAFDAIHPNRAELLASADT
LVGHGQALAADRAEGKVSLFGDDLSGGHRPRLTRAEPWTPTERLDEELAAVGFYLSGHPL
DDMVEALRRKRTDLLTDAIARAVAGAEALRMAGVIRRKQERPSRTGEKFAFVTFSDPTGE
YEVLFPPESLRKCRDLLEPGRAVVLKVRAKASEGEVRFFGDDVEPVEKAIENVVAGLRVH
VAPRSAEIEALKRRLEGVTNTRGGEVILVAGLDGGREVELKLPGRFTLDGAVRGALKTAP
GVVFIEDL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggagagggcccggccacggctgacgcaggcttcgtccacctccgcgtccgctcc
gcctactcgttgctggaaggcgcgatcaaggccgacaagatcggcgacctggccaaggcg
tggggcatgcccgccgtcgcgctcgccgaccgggccaatctgttcggcgcgctggagttc
tcggtcgccaccaagggatccggcgtccagccgatcatcggctgcgccctgccggtcagc
ggcatcggcgaccgcccgcccgaacgctgggccaagacgccgacgatcatgctgctggcg
cagagcgagcagggctatctcaacctctgcgaactgtcctcggcggcctatctggacgtg
gacgcctcggaagagccgcacgttccctggaccaaggtggtcgagcggtccgagggcctg
atcctgctgtcgggcggccccgacggccccgtggaccacctgttcgccgccgggaaggtc
aaggagggccgggcggccctggccgagatgaagcgggcgttcggcagtcgcttctacgtc
gagctgcagcgccacggcctgcccgccgaagccgccgccgagggcgaactggtggccttc
gcttacgacgaggacgttccgctcgtcgccaccaacgacgtctatttcaagaacccgcag
atgcaccaggcgcacgacgcgctgctgtgcatcgccgacggcagcttcgtgggccaggac
gagcgccggcgggtgaccgccgagcactggttcaagtcgccggccgacatgcgcgcgctg
ttcgccgacctgcccgaggcctgcgacaacaccctcgacatcgcgcggcggtgcgccttc
atggtgcacaagcgcgatccgctgctgccgagcttcaccgacgagggccgatccgaggcc
gaggagctggcgcaccaggcgcgcgaggggctgagggcccgcatggccgcgggccaggcg
aacgctttcccggccgaggagtacgaggcccgcctggagcgcgagatccaggtcatcacc
cagatgggattcccgggctacttcctgatcgtctcggacttcatcaagtgggcgaaggcg
cgcggcatcccggtggggccggggcgggggtcgggcgcgggctcgctggtcgcctacgct
ctgaccatcaccaacctcgacccgctgcgctacggcctgctgttcgagcgcttcctgaat
cccgagcgggtctcgatgcccgacttcgacatcgacttctgccaggagcggcgggaggag
gtgatcaactacgtccagcagcgctacggccgggacaaggtcgcccagatcatcaccttc
ggcacgctgcaggcgcgggccgtgctgcgcgatgtcggccgggtgatgcagctgccgctg
ggccaggtggaccgcctggccaagatggtgccggccaacccggccaatccggtgaccctg
gcccaggccctggacatcgagccgcggctgaaggaggaggccgcccgcgacgaggcggtg
gcgcgcctgctcgacgtcgccctgcagctggagggcctctaccgcaacgcctcgacccac
gccgccggcgtggtgatcggcgaccggccgctgacccagctgacgccgctgtaccgcgat
ccccgctcggagctgccggccacccagttcaacatgaagtgggtcgagagcgcgggcctg
gtgaagttcgacttccttggcctgaagacgctgaccgtcatcgaccgggcggtgaagcac
ctggagaagcgcggcgcggcggtcgacatgaacgccctgccgctcgacgacgggcccacc
tacgagctgatgagcaacgcccagaccatcggggtcttccagctcgaagggcaggggatg
cgcgacaccctgcgccagctgcggccgtccagcattgaggacgtgaccgccatcgtctcg
ctgtaccggccgggcccgatggacaacatcccggcgttcgtggactgcaagttcggccgc
aagccgatcgacacccttcaccccctgctggaaggggtgctgaaggagacctacggcatc
atcgtctaccaggagcaggtgatgcagatcgcccagatcctggcgggctacagcctgggc
gaagccgacctgctgcggcgcgccatgggcaagaagaagaaggaggagatggaggcgcag
cgcgcgcggttcgtctccggggccgaggccaagggcgtgcctgcggcccagtcgggcgcc
atcttcgacctcgtcgacaagttcgccggttacggcttcaacaagtcccacgccgcggcc
tacgccgtggtcagctaccagaccgcctggctgaaggcgaacgcgccggtcgagttcttc
gccgcctcgatgagcctcgacatcgccaacacggacaagctctcggtgttctaccaggac
gccaagcgcttcggcgtgaagatccgtccgccgtgcgtgaaccgctccggcgctgacttc
gaggtggagaacggcgaggtgctctacgccctcggcgccatccgcaacgtcggcctgcag
gccatggagcatgtggttcaggtgcgccgcgagggcgggccgttccgcgacatcttcgac
ttcgtcgagcgcatcgaccccaagcaggtcaacaagcgcaccttcgagaccctggcgcgg
gccggggccttcgacgccatccatccgaaccgggccgagctgctcgcgtcggcggacacc
ctggtgggccacggccaggcgctggccgcggaccgtgccgagggcaaggtcagcttgttc
ggcgacgacctgtcgggcggccaccggccgcggctgacgcgggccgagccctggaccccg
accgagcggctggacgaggagctggcggcggtgggcttctacctgtcgggccacccgctg
gacgacatggtcgaggcgctgcgccgcaagcgcacggacctgctgaccgacgcgatcgcc
cgggcggtggccggcgccgaggccctgcggatggccggggtcatccggcgcaagcaggag
cgcccgtcgcgcaccggcgagaagttcgccttcgtgacgttctcggatccgaccggcgag
tacgaggtgctgttcccgcccgagtcgctgcgcaagtgccgcgacctgctggagcccggc
agggccgtggtcctgaaggtgagggcgaaggccagcgagggcgaggtgcgcttcttcggg
gacgacgtggagccggtggagaaggccatcgagaacgtggtcgccggcctgcgcgtccac
gtggccccgcgcagcgccgagatcgaagcgctgaaacgccgcctggagggggtgaccaac
acccggggcggcgaggtcatcctggtggcggggctggacggcgggcgcgaggtggagctg
aagctgcccggccgcttcaccctggacggggccgtgcgcggcgcgctcaagaccgccccc
ggcgtggtgttcatcgaggatctctag
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