Phenylobacterium zucineum: PHZ_c1867
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Entry
PHZ_c1867 CDS
T00750
Name
(GenBank) recombinational DNA repair protein (RecF pathway)
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pzu
Phenylobacterium zucineum
Pathway
pzu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PHZ_c1867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzu03400
]
PHZ_c1867
DNA repair and recombination proteins [BR:
pzu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PHZ_c1867
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PHZ_c1867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ACG78278
UniProt:
B4RCU1
LinkDB
All DBs
Position
complement(2095389..2096120)
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AA seq
243 aa
AA seq
DB search
MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRA
RVSDQLGSAAIEPVGEGPAALFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTG
ALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDDLVWVSPRTGRAVSRQAGEPY
KDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAFIFGPLNRPLPPARLWLLDRLSEA
GRL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaggacgacgccttcgtgctggccgcccgcgcccacggcgagacgggcgcc
atcgtcgagctgctcacctcggcccacggcaggtacgccgcccacgtggccggcggcgcc
tcgcgcaaggtgcggcccttcctgcagccgggcgcgcgggtgatcgcccgctaccgcgcg
cgggtctcggaccagctcggttcggccgccatcgagccggttggggaggggccggcggcc
ctgttcgacgatcccctggcgctgtcgggcctttcggccgccgccgcggtcgccgcgggc
gcgctgcccgagcgcgagccgcatccgggcgccttcctagccttcgaggcgctgaccggc
gcgctgacccatccggacgtctggcccgcggtcttcgtccgcttcgaggcggggctgctg
caggacctgggcttcggcctcgacctctcaaagtgcgccgccaccgggatcaccgacgat
ctcgtctgggtcagcccgcgcaccggccgcgccgtcagccgccaggcgggcgagccctac
aaggaccgcctgctggcgctgccgccattcctgctctcggcccagggcggcctgcgcgcc
ggcgacgtcgccgccggcctggcgctcaccggccacttcctggaggccttcatcttcggc
cccttgaaccggcccctgccgcccgcgcgcctctggctcctcgaccgcctctccgaagcg
ggacggctgtag
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