Phenylobacterium zucineum: PHZ_c2302
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Entry
PHZ_c2302 CDS
T00750
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pzu
Phenylobacterium zucineum
Pathway
pzu03420
Nucleotide excision repair
pzu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PHZ_c2302 (uvrD)
03430 Mismatch repair
PHZ_c2302 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzu03400
]
PHZ_c2302 (uvrD)
Enzymes [BR:
pzu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PHZ_c2302 (uvrD)
DNA repair and recombination proteins [BR:
pzu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PHZ_c2302 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PHZ_c2302 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACG78712
UniProt:
B4RFE2
LinkDB
All DBs
Position
2607774..2610098
Genome browser
AA seq
774 aa
AA seq
DB search
MSSESYEPPAPRVSDLARVDPPAADYLQGLNPEQREAVLATEGPVLVLAGAGTGKTRVLT
TRLAHILATGKARPWELLAVTFTNKAAREMRERISHMIGPAAEGLRWLGTFHSVAAQILR
RHAELVGLKSNYTILDDDDQERLIKQILEAENIDAKRWTPKALAGLIDHWKNRGWRPDQL
PPAEAQAFANGRGQALYRLYQERLRVLNACDFGDLLLHNITIFTSQPDVLADYHARFRYL
LVDEYQDTNVAQYLWLRLLAQKSQNLCCVGDDDQSIYGWRGAEVDNILRFERDFPGAKVV
RLERNYRSTSHILAAASGLIAANKSRLGKTLWTEAEGGEKVIVRGVWDGEAESRLIADEI
ERAKRAGRRYRDIAILVRASFQMRAFEERFVLLQIPYTVVGGPRFFERAEIRDAHAYLRL
IQSEDDDLAFERIVNTPKRGIGDTTVQKLLQVARLNGVSATRAARQIVLTDELAARTRTS
LANFLRDLDRWRAEAQHVAHPRLMEAVLEESGYTDALRLDKSPTAQTRLENLKELVQSMG
NFDTLQAYLEHVSLVMDLDRGPAADAVQIMTLHSAKGLEFPLVFLPGWEEGVFPSQRSMD
EKGEKGLEEERRLAYVGITRAREEARISFAANRQVYGRWTSQLPSRFVDELPLANVEASS
ETGYYGGGPGMQQHGSRWDESPSFGAGYSSPGWRRAQASNYRGSHPGRQQVIEGDGRLVV
TGSEAKSDYSRGDRVFHLKFGYGTVKGIEGNKLTVAFDKAGEKKVIDSFVEKQS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgagtcctacgagccccctgccccccgcgtgagcgacctcgcccgcgtcgat
ccgcctgccgccgactacctgcaaggcctcaatcccgagcagcgcgaggccgtgctcgcc
accgaggggccggtgctggtgctggcgggcgcgggcacgggcaagacgcgggtgctgacc
acccgtctcgcccacatcctggccaccggcaaggcccggccatgggagctgctggcggtc
accttcaccaacaaggccgcccgcgagatgcgcgagcggatctcgcacatgatcggcccg
gcggccgagggcctgcgctggctggggaccttccactcggtggccgcccagatcctgcgc
cgccacgccgagctggtggggctgaagtcgaactacaccatcctcgacgacgacgatcag
gagcgcctgatcaagcagatcctcgaggccgagaacatcgacgccaagcgctggaccccc
aaggcgctggccggcctgatcgaccactggaagaaccgcggctggcggcccgaccagctt
ccgccggccgaggcgcaggccttcgccaacggccgcggccaggcgctgtaccggctctac
caggagcggctgcgggtgctgaacgcctgcgacttcggcgacctgctgctgcacaacatc
accatcttcaccagccagcccgacgtgctggccgactaccacgcccgcttccgctacctg
ctggtggacgagtaccaggacaccaacgtcgcccagtacctgtggctgcggctgctggcc
cagaagagccagaacctctgctgcgtgggcgacgacgaccagtcgatctacggctggcgc
ggggccgaggtggacaacatcctgcgcttcgagcgggacttcccgggcgccaaggtcgtg
cggctcgagcgcaactaccgctccaccagccacatcctggccgccgcctcgggcctgatc
gccgccaacaagtcccgcctgggcaagacgctgtggaccgaggccgagggcggcgagaag
gtcatcgtgcgcggcgtctgggacggcgaggccgagagccggctgatcgccgacgagatc
gagcgggccaagcgcgccggccgccgctaccgcgacatcgccatcctggtgcgcgcctcg
ttccagatgcgcgccttcgaagagcgcttcgtcctgctgcagatcccctacacggtggtc
ggcggcccccggttcttcgagcgggccgagatccgcgacgcccacgcctacctgcggctg
atccagtccgaggatgacgacctggccttcgagcggatcgtcaacacgcccaagcggggc
atcggcgacaccaccgtccagaagctgctgcaggtcgcgcgcctcaacggcgtctccgcc
acccgcgcggcgcggcagatcgtgctgaccgacgagctcgcggcccggacgcggacgtcg
ctcgccaatttcctgcgggacctcgaccgctggcgcgccgaggcccagcacgtcgcccat
ccccgcctgatggaggcggtgcttgaggagagcggctacacggacgcccttcgcctcgat
aagagcccgaccgcccagacccggctcgagaacctcaaggagctggtccagtcgatgggg
aacttcgacacgctccaagcctacctggagcacgtctccctggtcatggacctcgaccgc
ggccccgccgccgacgcggtgcagatcatgaccctgcactcggccaagggcctggagttc
ccgctggtcttcctgcccggctgggaggaaggcgtctttccctcgcagcgctcgatggac
gagaagggcgagaagggcctcgaggaggagcggcgcctggcctacgtcggcatcacccgg
gcgcgggaggaggcgcggatcagcttcgccgccaaccggcaggtctacggccgctggacc
agccagctgccctcgcgcttcgtcgacgagttgcccctggccaacgtcgaggccagctcc
gaaaccggctactacggcggcggcccgggcatgcagcagcacggcagccgctgggacgag
agcccctcgttcggcgccggctattcctcgcccggctggcggcgggcgcaggcgtccaac
taccgcggcagccatcccggccgccagcaggtgatcgagggcgacggccggctggtcgtc
accggctctgaggccaagagcgactacagccgcggcgaccgcgtcttccacctcaagttc
ggctacggcacggtgaagggcatcgagggcaacaagctgaccgtcgccttcgacaaggcc
ggcgagaagaaggtcatcgacagcttcgtggagaagcagtcctag
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