Phenylobacterium zucineum: PHZ_c3388
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Entry
PHZ_c3388 CDS
T00750
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pzu
Phenylobacterium zucineum
Pathway
pzu03030
DNA replication
pzu03410
Base excision repair
pzu03420
Nucleotide excision repair
pzu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHZ_c3388 (polA)
03410 Base excision repair
PHZ_c3388 (polA)
03420 Nucleotide excision repair
PHZ_c3388 (polA)
03440 Homologous recombination
PHZ_c3388 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzu03032
]
PHZ_c3388 (polA)
03400 DNA repair and recombination proteins [BR:
pzu03400
]
PHZ_c3388 (polA)
Enzymes [BR:
pzu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PHZ_c3388 (polA)
DNA replication proteins [BR:
pzu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PHZ_c3388 (polA)
DNA repair and recombination proteins [BR:
pzu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PHZ_c3388 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PHZ_c3388 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
ACG79797
UniProt:
B4RBF2
LinkDB
All DBs
Position
3834031..3836865
Genome browser
AA seq
944 aa
AA seq
DB search
MGEIPRETTQDGPKVRLYLVDGSGFIFRAFHALPPLTRKTDGLPVGAVSGFCNMIWKLLV
EMKTQADAPTHLAVVFDHSEQTFRNKLYDQYKAHRPPPPEDLVPQFPLVREATKAFGVPC
LELPGYEADDLIAAYACKVRDMGGEVTIVSSDKDLMQLVGPRVFMLDTMKNARIGIEQVI
EKFGVTPDKVVDVQALCGDSVDNVPGAPGIGIKTASALINEYGDLDTLLARATEIKQPKR
RDTLIEYADQIRLSRELVRLDCDTPLPSPLDELAVDDPDPAVLSEFLERMEFRTLARRVG
DGKAGSAGQAAADTPRPETRAPEKPNHGKIDVTAYACVRDLPALDAWIAKAYARGIVAFD
TETDALSSATAGLCGVSLAVAPGEACYIPLGHCEAEGLQLEAAADLTQIPLEQAIARLKP
LLEDPSVLKVAQNAKYDIAVLSRYGIEVGPIDDTMLISYVLEAGLHNHGMDELSKLGLDH
EPIAFKSVAGTGKAQKSFKYVGLSEATCYAAEDADVTLRLWEHLKPRLAHEGLATVYETL
ERPMPKVLADMECAGAKVDAERLRQLSNEFGQRMAELEAEAHRLAGRPFNLGSPKQIGEV
LFKEMGLASGRVTATGAFSTDASMLEDLAAQGHELPRILLDWRQLSKLKGTYTDALVAAI
SEQTGRVHTSFSLASTTTGRLSSSDPNLMNIPIRTEEGRKIRRAFVAEPGKVLISADYSQ
IELRLLAHIGDIPQLKRAFREGLDIHAMTASEMFGVPVEGMPSETRRRAKAINFGIIYGI
SAFGLANQLGIPQDEAGAYIKTYFERFPGIRAYMDRTKQAARSQGFVHTIFGRKVNIPAV
KSKSQAERAFGDRAAINAPIQGSAADVMRRAMIRMPGALKAEGLTARMLLQVHDELVFEA
PEAEAEAVIRIAKAVMEKAAEPAVAISVPLVVEARAAPNWDDAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgagattccgcgcgagaccacccaggacgggccgaaggtccggctctatctcgtg
gacggctcgggcttcatcttccgcgccttccacgcgctgccgccgctgacgcggaagacc
gacggcctgccggtgggcgcggtctcgggcttctgcaacatgatctggaagctgctggtg
gagatgaagacccaggccgacgcgccgacccacctggccgtcgtcttcgaccactccgag
cagacgttccgcaacaagctgtacgatcagtacaaggcgcaccggccgccgccgcccgag
gacctcgtgccgcagttcccgctggtgcgcgaggcgaccaaggccttcggcgtcccgtgc
ctggaactgcccggctacgaagccgacgacctgatcgccgcctacgcctgcaaggtgcgc
gacatgggcggcgaggtgaccatcgtctcgtccgacaaggacctgatgcagctggtcggc
ccgcgggtcttcatgctcgacacgatgaagaacgcccgcatcggcatcgagcaggtgatc
gagaagttcggggtcaccccggacaaggtggtggacgtccaggccctgtgcggcgattcc
gtcgacaacgtgccgggcgcgcccggcatcggcatcaagaccgcctcggccctgatcaac
gagtacggcgacctcgacacgctgctagcccgcgccaccgagatcaagcagcccaagcgc
cgcgacaccctgatcgaatacgccgaccagatccgtctttcgcgtgagctcgtgcggctg
gactgcgacacgcccctgcccagcccgctggacgagctcgcggtggacgacccggatccg
gcggtcctgtccgaattcctggagcgcatggagttccgcacgctcgcccgccgggtgggc
gacggcaaggcgggctccgccggccaggccgcggccgacacgcccaggccggagacccgc
gcccccgagaagccgaaccacggcaagatcgacgtgaccgcctacgcctgcgtccgcgac
cttcccgccctcgacgcctggatcgccaaggcctacgcacgcgggatcgtcgccttcgac
accgagaccgacgcgctgtcgtcggcgaccgcgggcctctgcggcgtttcgctggccgtg
gcgccgggcgaggcctgctacatcccgctgggccactgcgaggccgaggggctgcagctc
gaagccgccgccgacctgacccagatcccgctcgaacaggccatcgcccggctgaagccg
ctgctggaggacccctcggtcctgaaggtggcccagaacgccaagtacgacatcgcggtc
ctctcccggtacgggatcgaggtgggcccgatcgacgacaccatgctgatcagctacgtg
cttgaggcgggcctgcacaaccacggcatggacgagctgtccaagctcgggctcgaccac
gagcccatcgccttcaagtcggtggccgggaccggcaaggcgcagaagagcttcaagtac
gtcggcctttccgaggccacctgctacgccgccgaggacgcggacgtcaccctgcgcctg
tgggagcacctgaagccccgcctggcgcacgaggggctggcgacggtctacgagaccctc
gagcggccgatgcccaaggttctggccgacatggagtgcgccggcgccaaggtggacgcc
gagcggctgcgccagctctccaacgagttcggccagcgcatggccgagctggaggccgaa
gcccaccgcctggccggccggcccttcaacctgggctcgcccaagcagatcggcgaggtg
ctgttcaaggagatgggcctggcctcgggccgggtgaccgcgaccggggcgttctcgacc
gacgcctcgatgttggaggacctcgccgcccagggccacgagctgccgcgcatcctgctg
gactggcgccagctctcgaagctgaagggcacctacaccgacgccctggtggcggcgatc
tcggagcagacggggcgggtgcacacctcgttctcgctggcctcgacgaccaccggccgc
ctgtcgtcgtccgacccgaacctgatgaacatcccgatccgcaccgaggagggccggaag
atccgccgcgccttcgtcgccgagcccggcaaggtgctgatcagcgccgactacagccag
atcgagctgcgcctcctggcccacatcggcgacatcccgcagctgaagcgggccttccgg
gaggggctggacatccacgccatgaccgcctcggagatgttcggggttcccgtcgagggc
atgccctccgagacgcggcggcgggccaaggcgatcaacttcggcatcatctacggcatc
tcggcgttcggcctggccaaccagctcggcatcccgcaggacgaggccggggcctacatc
aagacctacttcgagcgcttcccgggcatccgcgcctacatggaccgcacgaagcaggcg
gcccgcagccagggcttcgtgcacaccatcttcggccgcaaggtgaacatcccggcggtg
aagtccaagagccaggccgagcgcgccttcggcgaccgcgcggcgatcaacgccccgatc
cagggctcggccgccgacgtcatgcgccgggcgatgatccgcatgccgggcgccctgaag
gccgagggcctgaccgcccgcatgctgctgcaggtgcacgacgaactggtcttcgaggcc
cccgaggccgaggccgaggcggtgatccgcatcgccaaggcggtcatggagaaggccgcc
gagcccgctgtggcgatctcggtgcccctggtggtcgaggcccgcgccgcgccgaactgg
gacgacgcgcactag
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