Phenylobacterium zucineum: PHZ_c3427
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Entry
PHZ_c3427 CDS
T00750
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pzu
Phenylobacterium zucineum
Pathway
pzu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pzu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PHZ_c3427 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzu03400
]
PHZ_c3427 (mutM)
Enzymes [BR:
pzu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PHZ_c3427 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PHZ_c3427 (mutM)
DNA repair and recombination proteins [BR:
pzu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PHZ_c3427 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ACG79836
UniProt:
B4RC43
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All DBs
Position
3879338..3880201
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AA seq
287 aa
AA seq
DB search
MPELPEVETVRGGLAPVLEGRRLVRVEARRPDLRFPLPPGFVQILTGSTIVKLERRAKYL
LGRLDREDTLVMHLGMSGRFEIAHPEGEERPGRFHYAPDPDPKHAHVVFETEAGVRITYY
DPRRFGYMSLVNTATLDLHPWFAGLGPEPLSDDFDAAHLKAAFTGRRQGPKTLLLDQRIV
AGLGNIYVCEALNRARISPFKPAGRISRPRIEVLVAAIKDVLREAIAAGGSTLRDYAQAD
GALGYFQHSFRTYDREGQPCRNDGCRGVIGREVQAGRSTFYCPVCQR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgcccgaagtcgagacggtccgcgggggcctcgcccccgtcctggagggc
cgccggctcgtccgcgtcgaggctcgccggcccgacctgcgcttccccctgccgccgggc
ttcgtccagatcctcaccggctcgaccatcgtgaagctggagcggcgggcgaagtacctg
ctggggcggctggaccgcgaggacacccttgtcatgcacctgggcatgagcggccggttc
gaaatcgcccaccccgaaggcgaggagcggccgggccggttccactacgcgccggacccc
gaccccaagcacgcccacgtggtcttcgagacagaggcgggggtgcggatcacctattac
gatccccggcggttcggctacatgtccctcgtcaacacggccacgctcgacctgcatccg
tggttcgcgggcctggggcccgagcccctctccgacgacttcgacgccgcgcacctgaag
gccgccttcaccggccgccggcaggggcccaagaccctgctgctggaccagcggatcgtc
gcgggcctgggcaacatctatgtctgcgaggccctgaaccgggcgcgcatctcgcccttc
aagccggccgggcgcatctcgcggccccggatcgaggtcctggtcgccgccatcaaggac
gtgctgcgcgaggccatcgccgcagggggctcgaccctgcgcgactacgcccaggcggac
ggcgccctgggctatttccagcacagcttccgcacctacgaccgcgagggccagccgtgc
cggaacgacggctgccggggcgtgatcggccgcgaggtccaggccggacgctcgaccttc
tattgccccgtttgccagagatga
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