Qipengyuania aurantiaca: K3148_00530
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Entry
K3148_00530 CDS
T09825
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
qar
Qipengyuania aurantiaca
Pathway
qar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3148_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qar03019
]
K3148_00530
Enzymes [BR:
qar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K3148_00530
Messenger RNA biogenesis [BR:
qar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3148_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QZD89936
UniProt:
A0ABX8ZLP0
LinkDB
All DBs
Position
complement(105905..107272)
Genome browser
AA seq
455 aa
AA seq
DB search
MTQFTDLGLSQPVLQALDMKGYTEPTPIQAQAIPPVLEGRDLMGIAQTGTGKTAAFMLPS
IDRLRDADKQTPFKSCRMLVLAPTRELAGQIAESAKDYGALAGLKVHSIVGGTSVNKDRN
KLHRGTDILVATPGRLLDLIDQKAFRLDGVEVLVLDEADQMLDLGFIHALRKISELVPDD
RQTLFFSATMPKQIQELVGKYCRNPVKVSVTPESTTAERIDQYLFMVQQDEKQTLLELVL
SERHQVPRKFERVLIFARTKHGCDRIVKKLGQAGIPANAIHGNKSQPQRERALDEFKRAK
TPILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGRDGVAIAFCAEDERD
YLKDIRKKTDAEFERLPLPDNFRAVVEGVGPTKREPKQRMAKPKVRPMGGAAKPKPKQKH
PARKGKPAGAGQGGRPGGRPGGNRNRNRNRRRSQG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacacaattcactgacctcgggctatcgcagcccgtgctccaggccctcgacatgaag
ggctataccgagccgaccccgattcaggcgcaggccattccccccgtgctcgagggccgc
gacctgatgggtattgctcagaccggcaccggcaagaccgccgccttcatgctgcccagc
atcgaccgtctgcgcgatgccgacaagcagacgccgttcaaatcctgccgaatgctggtt
ctcgccccgacgcgcgaattggcgggccagatcgccgagagcgccaaggattacggcgct
ctcgcgggactcaaggtgcactccatcgtgggtggtacttcggtcaacaaggaccgcaac
aagctgcaccgcggaaccgacatccttgtcgccacgccgggccgcctgctcgacctgatc
gaccagaaagccttccgcctcgacggtgtcgaagtgctggtgctcgacgaggccgaccag
atgctcgacctcggctttatccacgcgctgcgcaagatcagcgagcttgtgcccgatgac
cgccagacgctcttcttcagcgccaccatgccgaagcaaatccaggaactggtcggcaaa
tattgccgcaacccggtcaaagtcagcgtgacgcccgaaagcaccacggccgaacgcatc
gaccagtatctcttcatggtccagcaggacgagaagcagacgctcctcgaactggtcctg
tctgaacgccaccaggtcccccgcaagttcgaacgcgtcctgatcttcgcccgcaccaag
catggctgcgaccggatcgtgaagaagctcggccaggctggcatcccggccaatgctatc
catggcaacaagagccagccgcagcgcgagcgtgcgctggacgaattcaagcgcgccaag
acgccgatcctgatcgccaccgatgtcgctgcgcgcggtatcgacatcccgggcgtcagc
cacgtcatcaattacgaactgcccaacgtgccagagcaatatgtccaccgcatcggccgt
accgcgcgtgcgggccgtgacggtgtcgccatcgccttctgcgccgaggacgagcgcgat
tatttgaaggacatccgcaagaaaaccgacgcggaattcgagcgtctgccgctgcccgac
aatttccgcgcggtggtcgaaggcgtgggtccgaccaagcgcgagcccaagcagcgcatg
gccaagcccaaggtccgtccgatgggcggtgccgccaagcccaagccgaagcagaagcac
ccggcgcgtaagggcaagcctgccggtgcagggcagggcgggcgtcccggtggtcgcccc
ggcggcaatcgcaatcgcaaccggaatcgtcgtcgcagccagggctga
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