Qipengyuania aurantiaca: K3148_10870
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Entry
K3148_10870 CDS
T09825
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
qar
Qipengyuania aurantiaca
Brite
KEGG Orthology (KO) [BR:
qar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qar03032
]
K3148_10870
03400 DNA repair and recombination proteins [BR:
qar03400
]
K3148_10870
Enzymes [BR:
qar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K3148_10870
DNA replication proteins [BR:
qar03032
]
Prokaryotic type
DNA Topoisomerases
K3148_10870
DNA repair and recombination proteins [BR:
qar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K3148_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF3045
PB1
Motif
Other DBs
NCBI-ProteinID:
QZD89314
LinkDB
All DBs
Position
2233289..2234335
Genome browser
AA seq
348 aa
AA seq
DB search
MGNGYTRAKVLPFAMTKLIYVDDQLPGITRKGAGKGWAYYDPQGALITDRAEKNRLNAIA
LPPAYVDAWFCPAPNGHILATGIDAKGRKQYRYHPEFRAQRESEKFDKCLAFGNLLPLVR
KKVEEDLKARKLTRERAVASVVRLLDLGAVRVGNEGYAERNKSFGATTLRRRHAEVTGKT
LKLRYKGKSGQMREVTLTDGSLATVVRRMQDLPGQNVFKYIDEDGDVQAVTSGDVNEYLE
ACMGERFTAKNFRTWHASVMGFECLRTGEGKMPMKALLECVAGQLGNTPAVTRKSYIHPA
VIDLVERQEEWRDGLQLPRATRWLTREERGLIALLQDCPSAAELLAAA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggggaacggatacacccgcgccaaggttcttcccttcgccatgacgaagctcatctat
gtcgacgaccagctgcccggaatcacccgcaagggtgcgggcaagggatgggcctattac
gatccgcaaggtgcgttgatcaccgaccgggccgagaagaatcggctcaacgcgatcgcc
cttccgccggcttatgtcgatgcgtggttctgcccggcgcccaacggccacatccttgcc
accggcatcgatgccaaggggcgcaagcagtaccgctaccaccccgaattccgcgctcag
cgcgagagcgagaagttcgacaaatgcctcgccttcggcaacctcctgccgcttgtgcgc
aagaaggtggaagaggatctgaaggcgcgcaagctcacccgcgaacgcgcggtggcgagc
gtcgtacgcctgctcgaccttggcgccgtgcgcgttggtaacgaaggctatgccgagcgg
aacaagagcttcggcgcgaccaccctgcgccgccgtcatgccgaggtaaccggcaagaca
ctcaagctgcgctacaagggcaagtctgggcaaatgcgcgaggtcacgctgaccgacggc
agcctcgccaccgtcgtgcgcaggatgcaggacctgccgggtcagaacgtgttcaagtat
atcgacgaggacggcgatgtgcaggccgtgacttcgggcgatgtaaacgaatatctcgaa
gcctgtatgggcgagcgtttcaccgccaagaacttccgcacctggcacgccagcgtcatg
ggtttcgaatgcctgcgcaccggcgagggcaaaatgccgatgaaagcgttgctcgaatgc
gtggctggccagcttggcaacaccccggccgtcacacgcaagagctacatccaccccgcc
gtcatcgacctggtcgaacggcaggaggaatggcgcgacggcctgcaactgccgcgcgcc
acgcgttggctgacacgcgaggagcgtggcttgatcgccctgctccaggactgccccagc
gcggcggaactgctcgcggcagcgtga
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