Qipengyuania aurantiaca: K3148_12835
Help
Entry
K3148_12835 CDS
T09825
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
qar
Qipengyuania aurantiaca
Pathway
qar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3148_12835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qar03019
]
K3148_12835
03009 Ribosome biogenesis [BR:
qar03009
]
K3148_12835
Enzymes [BR:
qar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
K3148_12835
Messenger RNA biogenesis [BR:
qar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K3148_12835
Ribosome biogenesis [BR:
qar03009
]
Prokaryotic type
rRNA processing factors
K3148_12835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QZD89670
LinkDB
All DBs
Position
2633137..2635869
Genome browser
AA seq
910 aa
AA seq
DB search
MATRMLIDARHPEETRVAVLKGNRIEEFDFESADKRQIKGNIYLAKVTRVEPSLQAAFVD
FGGNRHGFLAFSEIHPDYYQIPKEDRDALLAAEAEVAEEEQRLRAEEEERGEMPGDEYDA
EDESAEALAEDLAEDGLEEVDTSDKDDVATIEEGQLDGDEDDDDDSDDEDESDDKPRGRG
RRGRGRRQGKGGRTRAKEVDEARAKRMALRRKYKIQDVIQRRQVLLVQVVKEERGNKGAA
LTTYLSLAGRYTVLMPNSSHGGGISRKINSASDRKRLKQVVSDLSLPRSMGLIVRTAGLS
RTKTEIKRDFDYLARLWDEIRERTLSSAAPALIHSDSDLIKRAIRDIYNREIEEVVVEGE
DGYKSAKAFMKMLMPSHARRVKQYADPVPLFQRYGAEDQLKAMYDPVVQLKSGGYLVINP
TEALVSIDINSGRSTKEHNIEQTALHTNLEAAKEIARQLRLRDMAGLVVIDFIDQEHHSN
TRKVERAMKDALKNDRARIQVGRISSFGLMEMSRQRLRTGVLEATTRECPHCDGTGLVRT
ASSAGLSALRLIEEEAAKGKGTKIRLAASTEAAVYLLNEKRAELVEIEERYGVTVEVVPE
GEDEGAKMSVSSHGPKPKDAPKFEALVDDEEDEDDDIDTSDEDEDEDDRPRKKRRRRRGG
RGRNKNRDQNDSGDDSDDDDSDAEEGSDSDEDNGQDKPKKRRRRGGRRRGGRGRGKGNGD
EVTAEDAEKLEAVSEQVADDMAVVAGPDETPETAKAAAEEKPKKRAQRRKKKADEPAAEE
AASEEAKAEEKPKPKRTRKKKADAEAAATAETEEAPKPKRTRRKKADAEAPADVAAKEEP
AAEAPKPKRTRKKKAEPAEVAEQVAEDMAVDAGPEDTPQTAEAAADAKDESSDSKDAKPK
RGWWQRTFGE
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcgcatgctcatcgacgcgcgccacccggaagaaacacgggtggcggtcctc
aagggaaaccggattgaggaattcgatttcgaatctgccgacaagcggcagatcaagggc
aatatctacctcgccaaggtaacccgggtcgaaccttcgctgcaggcggccttcgtcgac
ttcggcggtaatcgccacggcttcctcgcttttagcgaaatccaccccgactattaccag
attcccaaggaagaccgcgacgccctgctcgcagccgaggcggaagtcgccgaggaagag
cagcgcctgcgcgccgaagaggaagagcgcggcgaaatgcccggcgacgaatacgacgcc
gaggacgaaagcgccgaagcgctcgccgaagacctcgccgaagacgggctcgaggaagtc
gacacctccgacaaggacgatgtcgccaccatcgaggaaggtcagctcgacggcgacgaa
gatgacgacgacgacagcgacgacgaagacgagagcgacgacaagcccaggggccgtggt
cgccgtggtcgtggccgtcgccagggcaagggtggccgcacccgcgccaaggaagtcgac
gaagcacgcgccaagcgcatggcgctgcgtcgcaagtacaagatccaggacgtcatccag
cgccgccaggttctgctggtgcaggtcgtcaaggaagagcgcggcaacaagggcgccgcg
ctgaccacctatctcagcctggctggccgctacaccgtgctcatgcccaacagcagccac
ggcggcggtatcagccgcaagatcaactcggccagcgaccgtaagcgcctgaagcaggtc
gtctccgacctcagcctgccgcgcagcatgggcctgatcgtgcgcaccgccggtctcagc
cgcaccaagaccgaaatcaagcgcgacttcgactatctcgcccgcctgtgggacgaaatc
cgcgaacggacgctgtcgtccgctgcacctgcgctgatccattcagacagcgacctcatc
aaacgcgccatccgcgacatctacaatcgcgagatcgaggaggtcgtcgtcgagggcgag
gacggctacaagtcggccaaggccttcatgaagatgctcatgcccagccacgcgcgccgg
gttaagcagtatgccgaccccgtgccgctgttccagcgctatggcgcggaagaccagctc
aaagcgatgtacgaccccgtggtccagctcaaatcgggcggctacctcgtgatcaacccg
accgaggcactggtctcgatcgacatcaactcgggccgctccaccaaggagcataatatc
gagcagaccgcgctccacaccaatctggaagcggccaaggaaatcgcccgccagctgcgc
ctgcgcgacatggccggcctggtggtgatcgacttcatcgatcaggagcaccactcgaac
acccgcaaggtcgagcgcgcgatgaaggacgcgctcaagaatgatcgcgcgcggatccag
gtgggccgcatttccagcttcggccttatggaaatgagccgccagcgtctgcgcaccggc
gtgctcgaggcgactacgcgcgagtgcccgcattgcgacggcaccggtctcgtccgtacc
gccagctccgccggtctttcggcgctgcgcctgatcgaagaggaagcggccaagggcaag
ggcacgaagatccgtctcgccgccagcaccgaagcggccgtctatctcctcaacgagaag
cgcgccgaactggtcgagatcgaggaacgctacggggtgaccgtcgaagtcgtccccgaa
ggcgaagacgaaggcgcaaagatgagcgtctccagccacggccccaagccgaaggacgcg
ccgaagttcgaagccctcgtcgatgacgaggaagacgaggacgacgacatcgacacctcg
gacgaggacgaagacgaggatgaccgtccccgcaagaagcgccgccgccgccgtggcggc
cgtggtcgcaacaagaaccgcgaccagaacgatagcggtgacgacagcgacgacgacgat
agcgatgccgaagaaggcagcgacagcgacgaagacaatggccaggacaagccgaagaag
cgccgccgtcgcggtggccgccgccgtggcggccgtggccgtgggaagggcaatggcgac
gaggtgaccgcagaagacgcggaaaagctcgaagccgtttcggaacaggtcgccgacgat
atggccgtcgttgcgggtcccgacgaaacgccggaaactgctaaagctgcggccgaggaa
aagcccaagaagcgcgctcagcgtcgcaagaagaaggccgacgaaccggctgccgaagag
gctgcgagcgaagaggcaaaggctgaggaaaaaccgaagcccaagcgcacgcgcaagaaa
aaggccgatgccgaagcggcggctactgccgagaccgaggaagcgcccaagccgaagcgt
acgcggcgcaagaaggccgacgccgaagctccggctgatgttgcagccaaggaagagccc
gcagccgaggctcccaagcccaagcggacccgcaagaagaaggccgagcctgccgaagtt
gccgagcaggtcgccgaggacatggccgtcgatgccggtcccgaggacacaccgcagacc
gccgaagcggctgccgacgcaaaggacgaaagctcggatagcaaggacgccaagcccaag
cgcggctggtggcagcgcaccttcggcgagtga
DBGET
integrated database retrieval system
