Qipengyuania aurantiaca: K3148_12985
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Entry
K3148_12985 CDS
T09825
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
qar
Qipengyuania aurantiaca
Pathway
qar03030
DNA replication
qar03430
Mismatch repair
qar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K3148_12985 (dnaE)
03430 Mismatch repair
K3148_12985 (dnaE)
03440 Homologous recombination
K3148_12985 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qar03032
]
K3148_12985 (dnaE)
03400 DNA repair and recombination proteins [BR:
qar03400
]
K3148_12985 (dnaE)
Enzymes [BR:
qar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K3148_12985 (dnaE)
DNA replication proteins [BR:
qar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K3148_12985 (dnaE)
DNA repair and recombination proteins [BR:
qar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K3148_12985 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
COE1_HLH
HHH_3
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QZD89699
LinkDB
All DBs
Position
complement(2664767..2668240)
Genome browser
AA seq
1157 aa
AA seq
DB search
MPYKPFVPLRVLSAYSMLEGAIDPKAMAKLAKERGFPAIAIADRNGLYGAVMFANACKAE
GIQPITGTLLGVARDEEGRVVDYLPLYAQSEAGYDNLCHLVSKAHLERPLEFEPHIQMSE
LEGRTEGLIALTGASEGGVTRLLAEGQTSHATALLDKLQALFPDRLYIELARRGNSVEEA
AEAALVDLAYERDLPLVATNPANFAEPHMYKAHDAMLCIANSTHVDADERPKSNPEAYVK
TAHMMDEAFDDLPEATANTLVIAQRCAYAPPYRKPILPSLAGDLEGEAKMLEEDARRGLE
ARLEPYGELPEDERKVYFDRLDYEVGIINQMGFPGYFLIVADFIKWAKDHDIPVGPGRGS
GAGSLVAWALTITDLDPIKLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQAKYGH
DHVAQIITFGKLKARAVLRDTGRILQMSYGHVDRICKMVPNHPTDPWTLPRALNGAADFK
AEYDNDNEVKRLIDLAMQLEGFPRNSSTHAAGVVIGDRPLAQLVPLYRDPRSDMPVTQYD
MKNVESSGLVKFDFLGLKTLSVLKKATDLLKKRDITIDLSQLELDDPAVYELMKAGNTVG
VFQLESEGMRRTLTAVKPTNFGDIIALVSLYRPGPMDNIPLFGKRKAGEVEIEYPHEKLE
GILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDIQRERFVEGCKEV
SGIEKAKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPEEFFAASMCFDMHQ
SEKLTIFVDDARRQGIAVEPPCLNKSEAEFTVEQTDTGYAVRYALAGIRNVGEKAMENIV
AEREVSGQFDSLQDLFERIPKGSMNSRQLEALACAGALDSLEPNRAKVFENADMLLAVAD
AADRERTSGQASMFGGEDAPGETLRLREVEDWPRAERMARERENFGFYFSAHPVAAWKDI
ASANGARTYASLMSGGAPSGGRSNAVMAAMVEKVNKGTTRRGKPFIRADFSDATGQFSAA
CFEEGMVERFLKWAEEQTCVLLQVELDLPSPDEPPRITVRGGTPLAEVKGATPMILTLDI
LDIAAVETLSAELSEAGKGQDEVLVTLRIGGELEPAMRLGRDFALDGELAERLASVPGLA
KVQLDKRRGGSHLRLVA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgccctacaagcctttcgtcccgctgcgtgtgctctcggcctattcgatgctcgaaggg
gcgatcgaccccaaggccatggccaagctggcgaaggagcgcggctttcccgccatcgcg
attgcggaccgcaacggcctctacggcgcggtcatgtttgccaacgcctgcaaggcggag
ggaattcagccgattaccggcacactgctcggcgtggcgcgcgacgaggaaggccgggtg
gtcgactatttgccgctctatgcacagagcgaggcgggctatgacaatctctgccacctc
gtgtcgaaagcgcatctggaacgcccgctggagttcgagccgcatatccagatgagcgaa
cttgaagggcgcaccgagggcctgatcgcactcaccggcgcgagcgagggcggcgtcacc
cgactgcttgcggaaggccagacgagccacgccaccgcgctgctcgacaaattgcaggcg
ctgttcccggaccgcctctacatcgagctcgcccgccgcggaaactcggtcgaggaagcc
gcggaggcggcgctggtcgacctcgcctatgagcgcgacctcccgctcgttgccaccaat
cccgccaatttcgccgagccgcatatgtacaaggcgcatgacgccatgctgtgtatcgcg
aactcgacccatgtcgatgcggacgagcgcccgaagtccaatcccgaggcttacgtcaag
accgcgcacatgatggacgaggccttcgacgacctgcccgaagccaccgccaacacgctc
gtcatcgcccagcgctgtgcctatgcgccgccttatcgcaagcctatcctccccagcctc
gccggtgacctcgaaggcgaggcgaagatgctggaagaggatgcgcggcgcggcctcgaa
gcgcggcttgaaccctatggcgaattgccggaggacgagcgcaaggtctatttcgaccgc
ctcgattacgaggtcgggatcatcaaccagatgggctttcccggctacttcctgatcgtt
gccgacttcatcaaatgggcaaaggaccacgatattccggtggggccgggccgtggttcg
ggtgcaggcagcctcgttgcgtgggcgctgacgatcaccgacctcgatccgatcaagctt
ggcctgctgttcgaacgcttcctcaacccggaacgcgtctcgatgcccgacttcgacatc
gacttctgcgaaacccgccgcggcgaggtgatccgctatgtgcaggccaagtacggccac
gaccatgtcgcgcagatcatcaccttcggtaagctgaaggcccgcgccgtgttgcgcgat
acgggccgcatcctccagatgagctacggtcatgtcgaccgcatctgcaagatggtgccg
aaccatccgaccgacccctggacgctgccgcgcgcgctcaatggggcggccgacttcaag
gccgagtacgacaacgacaacgaggtcaagcgcctgatcgacctcgcgatgcagctggaa
ggcttcccgcgcaacagctcgacccacgcggccggcgtggtgatcggcgaccggccgctg
gcgcagctggtcccgctctaccgcgacccgcgttccgacatgccggtgacgcagtacgac
atgaaaaatgtcgagagcagcggcctcgtcaaattcgacttcctcggcctcaagacgctg
tcggtcctcaagaaggcgaccgacctgctcaagaagcgcgatatcacgatcgacctgtcg
cagctcgaactggacgatccggcagtctacgaactgatgaaggcgggtaacaccgtcggc
gtgttccagctggaatcggaagggatgcggcgcacgctgaccgcagtgaagccgaccaat
ttcggcgacatcatcgcgctagtctcgctttaccggccgggtccgatggacaacatcccg
ctgttcggcaagcgcaaggcgggcgaagtcgaaatcgagtacccgcacgagaagctcgaa
ggcatcctcgccgaaacctacggcatcttcgtctaccaggaacaggtcatgcaggccgcg
cagatcctcgccggatattcgctcggcgatgcagacttgctgcgccgcgcgatgggtaag
aaagtccaggccgaaatggacatccagcgcgaacgcttcgtggaggggtgtaaggaagtc
agcggcatcgagaaagccaaggccaacgagctgttcgacttgatcgacaagttcgcaggc
tatggcttcaacaagtcgcacgccgccgcttacgcgctgctcgcgtatcagaccgcgtgg
ctgaaggcgcattacccagaagagttttttgccgcatccatgtgcttcgacatgcaccag
tcggagaagctgacgatcttcgtcgacgacgcgcgcaggcagggcatcgcggtcgagccg
ccgtgcctcaacaagtccgaagccgagtttaccgtcgagcagaccgatacgggctacgcc
gtgcggtacgcgctcgcaggcatccgcaatgtcggcgagaaggcgatggagaatatcgtc
gccgagcgtgaggtatccggccagttcgacagcctccaggacctcttcgagcggattccc
aagggctcgatgaattcgcgccagctggaagcgctggcctgtgcgggtgcgctcgacagt
ctcgagcccaaccgcgccaaggtcttcgagaacgccgacatgctgctggcggtcgccgat
gcggccgatcgtgaacgcaccagcggtcaggcgagcatgttcggcggcgaggatgctccg
ggcgagacactgcgcctgcgcgaggtcgaggactggccgcgcgccgaacgcatggcgcgc
gaacgcgagaatttcggcttctatttctccgcccatccggttgccgcgtggaaggacatc
gcttcggccaatggtgcgagaacgtatgcctcactgatgtcgggcggggcgccctccggt
ggccgctccaacgcggtgatggcggccatggtcgagaaggtgaacaagggcaccacgcgc
cgcggcaaacccttcatccgcgccgatttctccgacgcgaccggccagttcagcgcggct
tgcttcgaagaaggcatggtcgaacgcttccttaaatgggccgaggagcagacctgcgtc
ctcctccaggtcgaactcgatttgccgagtcccgacgaaccgccccgcatcaccgtgcgc
ggcggtactccgctggcggaggtcaaaggcgccacgccgatgatcctgacgctcgatatc
ctcgatatcgctgcggtcgaaacgctcagtgcggaattgtcggaggcgggcaagggacag
gacgaagtgctcgtgacgctacggatcggcggcgagcttgaacctgccatgcgactggga
cgcgacttcgcgctcgacggggagcttgcagaacgcttggcaagcgtgccgggccttgcc
aaggtgcagctcgacaagcggcgcggcggctcgcaccttcgcctcgtcgcctga
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