Quatrionicoccus australiensis: KI612_09235
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Entry
KI612_09235 CDS
T07598
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
qau
Quatrionicoccus australiensis
Pathway
qau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI612_09235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qau03019
]
KI612_09235
03009 Ribosome biogenesis [BR:
qau03009
]
KI612_09235
Enzymes [BR:
qau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
KI612_09235
Messenger RNA biogenesis [BR:
qau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KI612_09235
Ribosome biogenesis [BR:
qau03009
]
Prokaryotic type
rRNA processing factors
KI612_09235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
UCV16832
LinkDB
All DBs
Position
complement(1926902..1929685)
Genome browser
AA seq
927 aa
AA seq
DB search
MKRMLFNATQAEELRVAIVDGQKLIDLDIESAAKEQRKSNIYKGIITRIEPSLEACFVDY
GADRHGFLPFKEVSRSYFQPGIEVGRAKINEALKEGQELIVQVDKDERGNKGAALTTYVS
LAGRYLVLMPNNPRGGGVSRRVDGDERAELRDTMDQLEVPSGMSLIARTAAIGRQAEELQ
WDLNYLMQLWTAIEGAAKQQSGAFLIYLEGSLVIRAIRDYFHSEIGEILIDTDEVYEQAR
AFMGTVMPANINRVKRYRDDVPLFSRFQIEHQIETAFVRQVNLPSGGAIVIDHTEALVAV
DVNSGRATKGADIEETAFKTNLEAAEELARQLRLRDLGGLIVIDFIDMENQKNQREVENR
LRDALRFDRARVQMGKISRFGLMELSRQRLRPALAETSYISCPRCTGTGHIRSTESAALH
ILRILEEEAMKENTGAVHVQMPVDVATFLLNEKRPDIQAIELRHKVTILLIPNIHLETPA
HSITRLRHDDLNNDDVREPSYKMVDAPIEEASKPGNGKDEAAKPRQEAMIKGISPEQPAP
IMPEKTVEVPAPAAAQAEAGLIAKIFSWFRSEPKAAEPAPVAQPAPKKPREGRNEGRRER
GEGRDGRRNGRNKGRDEERGNRNERGERNAEKAPREESTATTANAGERQERRPRGERKER
RDRQQPAETSVDNKLNAPVATAETANLNLPGNAGDAPEAGNGEEQGARRRGRRGGRGRGE
RRNEAENNGVNAAPAETQDKAPAVAESAEQISQEPVVVVIPAPEPAAQPAPVLAQEAAPA
AVEPVAVTITEAVAPAVEAAAPVAEVTAPAVEVTAPATEVAAPAEALAAPVEAAPQPEIA
PPAAEPEVAIAAVAVDVVESSKIVAPVAVPVDLEKTLSESGLVLVQTTAAPLMAQPEAPV
KLGRPRKQKTAAEQSQDAPLVMVETQN
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgcttttcaatgcgacacaggctgaagaactccgtgtcgccattgttgat
ggtcagaaactgattgacctagacattgaatcagccgccaaggaacaacgtaaaagcaat
atttacaaggggatcatcacccgcatcgaacccagtctcgaagcctgcttcgtagactac
ggcgcggatcgacacggcttcctgccgttcaaggaagtctcccgttcctatttccagccc
ggcatcgaagttggtcgcgccaagatcaacgaagccctcaaggaaggtcaggaactgatc
gtccaggttgacaaggacgaacgtggcaacaagggcgccgccctgaccacctacgtttcc
ctggccggccgttatctcgtgctgatgccgaacaacccgcgcggcggtggtgtttcccgt
cgcgtcgacggtgacgagcgcgccgaattgcgcgacaccatggaccagctcgaagtgccc
agcggcatgagcctgatcgcccgtaccgcagccatcggccgtcaggctgaggaactgcag
tgggacttgaattacctgatgcagctgtggaccgccatcgaaggcgccgccaagcagcag
agtggtgctttcctgatctacctcgaaggcagcctggtcatccgcgccattcgcgactac
ttccactcggaaatcggtgaaatcctcatcgacaccgacgaggtgtacgaacaggcccgc
gccttcatgggcacggtgatgccggccaacatcaatcgcgtcaaacgttaccgcgatgat
gtaccgcttttctcgcgcttccagatcgaacaccagatcgaaaccgccttcgtccgccag
gtcaacctgccgtccggcggcgccatcgtcatcgaccacacagaagcgctggttgcagtc
gacgtgaactccggtcgcgccaccaagggtgccgatattgaagaaaccgcgttcaagacc
aatctcgaagccgcagaagaactggcccgccagctccgcctgcgcgacctcggcggcctg
atcgtgatcgacttcatcgacatggaaaaccagaagaaccagcgcgaagtcgaaaaccgc
ctgcgcgatgcgctgcgtttcgaccgtgctcgcgttcagatgggcaagatcagccgcttc
ggcctgatggaactgtcgcgtcagcgcctgcgtccggctctcgccgaaaccagctacatc
tcctgcccgcgctgtaccggcaccggccacatccgctccaccgaatcggccgcgttgcac
atcctgcgcatcctcgaagaggaagcgatgaaggaaaataccggcgccgtgcatgtccag
atgccggtcgatgttgccaccttcctgctcaacgagaagcgcccggacatccaggccatc
gaattgcgccacaaggtcaccatcctgctgatcccgaacatccacctggaaacgccggca
cattcgattacccgcctgcgccacgacgacctcaacaacgacgacgtgcgtgaaccgtcc
tacaagatggtcgacgccccgatcgaggaagccagcaagccgggcaacggcaaggacgaa
gctgccaagccgcgccaggaagccatgatcaagggtatctcgccggaacaaccggcgccg
atcatgccggaaaagacggtggaagtgccggcaccggcagcggcacaggctgaagccggc
ctgatcgccaagatcttctcctggttccgtagcgagcccaaggctgccgaaccggcaccg
gttgcccaaccggcaccgaaaaagccgcgcgaaggccgcaacgaaggtcgtcgtgaacgt
ggcgaaggcagggatggccgccgcaacgggcgcaacaagggacgtgacgaagaacgcggc
aatcgcaacgaacgcggcgaacgcaacgcggaaaaggccccgcgtgaagagtcgaccgct
acgacagccaatgcaggcgagcgtcaggaacgtcgcccgcgcggcgaacgcaaggaacgc
cgcgatcgccagcaaccggcggaaaccagcgtcgacaacaagctgaacgctccggtcgct
accgctgaaacggccaacctgaatctgccgggcaacgccggcgatgcccccgaagccggc
aacggcgaagaacagggcgcccgtcgccgtggtcgtcgcggtggtcgcggccgcggtgaa
cgccgcaacgaagccgagaacaacggcgtcaatgcagcaccggcggaaacgcaggacaag
gctccggcagttgccgaaagcgccgagcagatcagccaggaaccggttgtcgtcgtgatt
ccggcaccggaaccggccgcccagcctgccccggtcctcgcccaggaagctgcaccagct
gctgtcgagccggttgccgtcaccatcaccgaagccgtcgctccggcagttgaagccgcc
gctccggtagctgaagtcacagctccggcagttgaagtcacagctccggcaactgaagtc
gctgcaccggcggaagcacttgctgcacctgtcgaagccgcgccgcaacctgaaatcgct
cctcctgcagccgaaccggaagtcgcgattgccgccgtagcggtcgacgtcgtcgaaagc
agcaaaatcgtggcaccggtcgccgttccggttgatctggaaaagaccctttccgaaagc
ggcctggtcctcgtgcaaaccacggcggcaccgctcatggcccaaccggaagcacccgtg
aagctggggcgtccgcgcaagcagaagactgctgccgagcagtcccaggatgcaccactg
gtcatggtggaaacgcagaactga
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