Quatrionicoccus australiensis: KI612_16325
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Entry
KI612_16325 CDS
T07598
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
qau
Quatrionicoccus australiensis
Pathway
qau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI612_16325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qau03019
]
KI612_16325
Enzymes [BR:
qau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KI612_16325
Messenger RNA biogenesis [BR:
qau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KI612_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UCV17135
LinkDB
All DBs
Position
3411937..3413406
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AA seq
489 aa
AA seq
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MTFADLGLAPELLRAVLEEGYTKPTPIQAQAIPLVIRGQDIMGGAQTGTGKTAAFTLPIL
QRILPFASSSPSPAKHPVRALILAPTRELALQVYESVKAYSKHTHLRSMCAFGGVDIRPQ
IAELKKGVEILVATPGRLLDHVENKSVSFNSVQALVLDEADRMLDMGFVPDVTRILNMLP
AQRQSLLFSATFSEEIKRLADTMLRSPVLIEVARRNQVSDNITHRVHPVSEYGKRGLLIK
LLKSSEIRQCLVFMRTKQGCSRLTRELQRAGIQADAIHGDKSQLERIKALDAFKAGETHA
LIATDVAARGLDVDDLPYVINYELPHTPEDYVHRIGRTGRAGKLGNAISLVSAHEVGYLV
DIEKLIKRPIEQVEVVGFEPEAEYEYPPGNKKKRSAPAAAPTKAPVAQRPERGERNERAD
RNDRGDRHERRPARRNPMIAADGFDFSKPYEDTSPRSDVPDSPQAPAKIDPHKPKRVVAA
LLGGLGRKQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
attacctttgccgatctcggcctggcccctgaactgctgcgcgcggttctcgaagagggt
tataccaagccgacgccgatccaggctcaggcgattccgctcgtcatccgcggccaggac
atcatgggcggcgcccagaccggcaccggcaagacggccgccttcacgctgcccatcctg
cagcgcatcctgccctttgcgagcagcagcccgtcgccggccaaacatccggtacgcgcc
ctgatcctcgcaccgacccgcgaactcgccctgcaggtctatgaatcggtcaaggcctac
agcaagcacacgcacctgcgctcgatgtgcgcctttggcggcgtcgatatccggccgcag
attgccgaactgaagaagggtgtcgagattctcgtcgccacacccggtcgactgctcgac
cacgtcgaaaacaagagcgtcagcttcaactcggtgcaggcgctggttctcgacgaagcc
gaccgcatgctcgacatgggcttcgtgcccgacgtcacgcgcatcctcaacatgctgccg
gcacaacgccagagcctgctgttctcggcgaccttctccgaggaaatcaagcgcctcgct
gacaccatgctgcgttcaccggtgctgatcgaagtcgcccgccgcaaccaggtctccgac
aacatcacgcatcgtgtgcatccggtttccgaatacggcaagcgcggcctgctgatcaag
ctgctgaaatccagcgaaatccgccagtgcctcgtcttcatgcgcaccaagcagggctgc
tcgcgcctgacccgcgaactgcagcgtgccggcatccaggccgatgcgattcacggcgac
aagagccagctcgaacgcatcaaggcgctcgatgccttcaaggccggcgagacgcacgcc
ctgatcgcgaccgacgtggccgcgcgcggcctcgacgtcgacgacctgccctatgtgatc
aactacgaactgccgcacacgccggaagactacgtgcaccgcatcggccgcaccggccgc
gccggcaagctgggcaatgcgatttcgctggtcagcgcgcacgaagtcggctacctggtc
gatatcgaaaagctgatcaagcgcccgatcgaacaggtcgaagttgtcggtttcgagccg
gaagcggaatacgaatacccgccgggcaacaagaaaaagcgcagcgcccctgccgccgcc
ccgaccaaggcccccgttgcccagcgcccggagcgtggcgagcgtaacgagcgggctgat
cgcaatgatcgcggcgaccgccacgagcgccgcccggcgcgccgcaacccgatgatcgct
gccgacggtttcgacttcagcaagccttacgaggacaccagtccgcgcagcgacgtgccg
gattcgccgcaggcaccggccaagatcgacccgcacaaacccaagcgggtggtcgccgcc
ctgctcggcggcctgggtcgcaagcagtaa
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