Quatrionicoccus australiensis: KI612_19570
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Entry
KI612_19570 CDS
T07598
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
qau
Quatrionicoccus australiensis
Pathway
qau02020
Two-component system
qau02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
qau00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KI612_19570
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KI612_19570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qau03021
]
KI612_19570
Transcription machinery [BR:
qau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KI612_19570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_Crp_2
HTH_23
HTH_38
Sigma70_r4
DUF6160
Motif
Other DBs
NCBI-ProteinID:
UCV15083
LinkDB
All DBs
Position
complement(4118259..4119725)
Genome browser
AA seq
488 aa
AA seq
DB search
MKPALQLKLSQHLALTPQLQQSIKLLQLSTVEMQQEIERYLLENPMLEREDEAGTESFGA
AQQFDSPANETTRSEPTEERERDPREEREQEVPSAPSEVDDDRWASDAGTFTGAGRDEDD
DSDSRDIHSAATSLREHLGWQLGMTQLSERDRSLVRFLIEALDDDGYLSATLEELWETLP
PEYEIELEELEIALHHIQHFDPTGIGARSPSECLALQLKAMPADEVQALALAIVEKHLEL
LAARDFAKIRRLTACDDDELKAAQSLIVSLNPRPGARFSQTEARYITPDVMVRKLKGKWT
AYINPDAYPRLRINRLYAEILSRQRRGNGNLTGQLQEARWLIKNVQQRFETIHRVTQAIV
DRQRQFFEHGEVAMRPLVLREIADILGLHESTVSRVTSQKYMATPRGIFELKYFFGSHVS
TDTGGACSATAIRALIKQLISAEDGKKPLSDSQLSEILGQQGIVVARRTVAKYRESLNIP
PVNLRKTL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagctctccaactaaaactatcccagcatctggcactgacgcctcagttgcag
cagtcgatcaagctattgcagttgtcgacggtcgagatgcagcaggaaatcgagcgttac
ctgctggaaaatccgatgctggagcgcgaggacgaggccggtacggaatcctttggggcg
gcgcagcaattcgattcaccggccaacgaaacgacgcgcagcgaaccgactgaagagcgc
gaacgtgatccgcgcgaggaacgcgagcaggaagtgccgagcgcaccttccgaagtcgat
gatgatcgctgggcttccgatgccgggacctttaccggtgccgggcgtgatgaagacgac
gacagcgattcacgcgacatccattcggccgccaccagcctgcgcgaacatctcggctgg
cagctgggcatgacccagctcagcgaacgcgatcgcagcctggtccgtttcctgatcgaa
gcgctggacgatgacggctatctctcggccacgcttgaggagctgtgggaaaccctgccg
ccggaatacgagatcgagctcgaagagctggaaatcgccctgcaccacatccagcatttc
gatccgaccgggatcggcgcgcgcagccccagcgaatgcctggcgctgcaattgaaagcg
atgccggccgacgaagtacaggcgcttgccctggcgatcgtcgagaagcatctggaactg
ctcgcggcgcgcgattttgccaaaattcgccggttgaccgcctgtgacgacgatgaactg
aaggcggcacaatccctgatcgtcagcctcaatccgcggccgggggcgcgtttctcgcag
accgaggcgcgctacatcacgccggacgtaatggtcaggaagctcaagggcaaatggacc
gcctacatcaatccggatgcctacccgcgcctgcgcatcaaccgtctgtatgccgagatt
ctgtcgagacagcggcgcggcaatggcaacctgaccggccagttgcaggaagcacgctgg
ctgatcaagaacgtgcagcagcgtttcgagaccatccaccgcgtgacgcaggccattgtc
gatcgtcagcgccagtttttcgaacatggtgaagtcgccatgcggccgttggtcctgcgc
gaaatcgccgatattctcggtttgcacgagtcgaccgtctcgcgcgtcaccagccagaaa
tacatggcgacgccgcgcggcatctttgaattgaaatactttttcggcagtcatgtgtcc
accgataccggtggtgcctgttctgccaccgccattcgcgccctgatcaagcaattgatc
agtgccgaggatggcaagaagcccttgtcggatagtcaattatccgaaatactaggccag
cagggaattgttgtagcccgacgcacggtagccaaatatcgcgagtcactcaacatcccg
ccggtcaatttacgcaagaccctgtag
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