Qipengyuania citrea: NCF85_02260
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Entry
NCF85_02260 CDS
T08274
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
qci
Qipengyuania citrea
Brite
KEGG Orthology (KO) [BR:
qci00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qci02000
]
NCF85_02260
Transporters [BR:
qci02000
]
Other transporters
Pores ion channels [TC:
1
]
NCF85_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
HTH_39
Motif
Other DBs
NCBI-ProteinID:
USA61828
LinkDB
All DBs
Position
470986..475197
Genome browser
AA seq
1403 aa
AA seq
DB search
MATEQPAADIEERPVRRRLRVGRVGKWLLGIAGAFVLLIVGALVVLNTPLGERFIASRIA
ERTFPNGLNIRIGRIEGNLYGAAVLHDVRLSDPKGVFLTIPRAEIDWNPGGWLSNRLEID
SFAARRATLARTPEFLPSEEDNPVLPGFDISIDRLEIDNLTLAPGIAGNRPQRVDITGSA
DVTDSRLMVDIDGRLGERDRLALLLDAEPDGDAFDLSLDVDASADGPITAMAGLDAPYTA
RIRGDGTWSHWSGSLLVRSEDARIAAMRITNASGRLGLLGKFDPSDFLSGIPARALGDDV
ALKADIAIDQRRFDGRVMMAGRGLILDANGLLDLADNRAENIELAASVRDPNLLGEGIGL
RNGRIDATVDGAFADLAIRHDLTVGEVDIGGTKLAGLRQQGTARYDGTRWTLPLGLAVSR
VTSGNAMLDPRLVNGTGRGTLMLSGSTLLSDDLRLAFPGTSANLALRGDLSAGRYQIRGP
IRAERLPLDNVGTLNGTAVIQLALAPQSPWRLSADLDARIAPVTNATLANLAGTPIRVRG
GVAVGGNAPLDFNRLRIDASKVQMALDGSVRDGTTQLAGEGTHTDFGPFTVEASLTDAGP
SAALVFARPATGLDNVRVAIAPAEEGFAIDTEGNSVLGPFAGQLGLIAPSGGPTRIAIET
MRVSDTSVTGAIALVDGGADGTLAFAGGGLDGTVALTPRGGGQGLQVDLRARNARFGGDT
PLRITRADIDATGLIRDGNTSFSGSGTAAGLSYGTLFISQLAARGEVENGVGRVDASLSG
RRSGRFVLDANATIRPDRIALAAQGRFAGRRISMPRRAVLTSLDSGGWRLAPTQFSYGDG
GMIVSGDFGGRDLDFDFKLARMPLSLIDVAKADTGLGGTISGTVHYRTGADMVPVGEAKV
KIEGLTRSGLVLTSRPVNVSLVAELTESDLQARALLQNEDIQRGRVQARITGLPQQGILI
ERLRAGRLSGQLRYRGAAESLWRLAALDTFDITGPIAIAANATGTLRDPTVRGSISGDSL
QLRSSLSGTDIRDIAMRGRFQGSRLQLTRFAGTAVNGGSVSGSGIVDLRTLGETVQGRVL
EIRGPIIDLRASAKNARLLDTGGLSATVTGPLRIVSDGLGGTIAGKVRVNRASWTLGTAA
DDLRVPQIATREINTPANRDPQVAAGRPWQYLINAKASSRIDVDGMGLDSEWAADIVLRG
NTSDPRIGGRAEVVRGNYTFAGTRFELTRGEIEFDVDAPIDPLLDIRAETDRDGLNVEAN
VRGSATQPEITFTSNPSLPEEELLARLLFGGSVTSLSATDALQLGAAVASLRGGGGMDPI
NQLRSAIGLDRLRIVSADPALGRGTGVALGKNFGRRFYAEIITDGRGYSATEVEFRVTSW
LSLLAAVSTVGRESVVAEISRDY
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaacaaccggccgcagacatcgaggagcgtcctgtccggcggcgccttcgc
gttgggcgcgttggcaagtggctgctcggcattgcgggtgctttcgtacttctgatcgtt
ggggcgcttgtcgttcttaacacgccgcttggtgaacgcttcatcgccagccgcattgcg
gaacgcactttccccaatggcctcaacatccggatcggacgaatagagggtaatctctat
ggggcagcagtccttcacgatgtgcgcctgtccgatcccaagggcgtctttctcaccata
cctcgcgccgaaatcgactggaatccggggggctggctttccaaccggctggaaatcgac
agcttcgccgctcgccgggctactctcgcacgcactccggaattcttgccaagcgaagaa
gacaatcccgtactgcccgggttcgacatctcgatcgaccggctcgaaatagacaatctg
acccttgctcccggtatcgccggcaaccgcccgcagcgggtcgatatcaccggcagtgcc
gatgttaccgacagtcgcctcatggtcgatatcgatggccgtctgggcgaacgggaccgg
ctcgcgctgctgctggatgccgaaccggacggcgatgccttcgacctgtctctcgatgtc
gatgcatcggcagatggtccgatcacagccatggccggtctcgacgccccctataccgca
cgcattcgcggggatggcacatggtcgcattggtccggcagcctgctggtccgtagcgag
gacgctcgcatcgcggcgatgcgcattaccaatgcatcgggacgtttgggcctccttgga
aagttcgatccgtcggatttcctcagcggtatccccgcgcgtgcgctgggcgatgatgtc
gcgctcaaagcggacatcgcgatagaccagcgccgcttcgatggccgtgtgatgatggcc
gggcgtggattgatcctggatgccaatggcctgctcgaccttgcggacaacagggcagaa
aatatcgaactggccgcttccgtgcgcgacccgaacctgctcggcgaaggtatcggcctg
cgcaacgggcggatcgatgcgacggtcgacggggcctttgcggatctcgcgatccgccac
gatctgacggtgggcgaagtcgacatcggcggtacgaagttggctggcctccggcagcag
ggcactgcccggtacgatggcacacggtggacgctgcccttggggcttgcggtctcgcgg
gtgacgagcggcaatgccatgctcgatccgcgcctggtgaacggcaccgggcgcggcacg
cttatgctgagcgggtcgacccttctgtcggatgatctgcgtcttgccttccccggcacc
tcggccaatctggctcttcgcggtgatctgtccgcgggccgataccagatccgcgggccg
atccgcgcagaacggctgcccctcgacaatgtcggcacgttgaacgggaccgcggtcatc
cagcttgccctcgcaccgcaatcaccgtggcggctctcggccgatctcgatgcgcgcatt
gcccctgttaccaacgcgacgctggccaatctcgccggcacccccatccgcgtgcgcggc
ggggtcgcggtgggcggcaatgccccgctcgatttcaaccgtctgcgtattgatgcaagc
aaggtgcagatggcgctcgatggcagcgttcgggacgggactacccagcttgcaggggag
ggcacgcataccgatttcggccccttcaccgtggaggccagcctcaccgacgccgggccg
agcgccgcgctggttttcgcccggcctgcgaccggcctcgacaacgtccgcgtggcgatc
gccccggcagaagagggttttgccatcgataccgaaggcaattcggtgctcggacccttt
gccggccagcttggccttatcgcaccgtccggcggtccgacccgcatcgcgatcgagacc
atgcgcgtgtccgataccagtgtcaccggcgccattgcgctggtggatggcggcgcggac
ggcacgctcgctttcgccggtggcggcctcgacgggaccgtggcgctgacgccgcgcggc
ggcggacagggcctgcaggtcgacctgcgagcccgcaatgcgcgcttcggcggcgatacg
cccttgcgcatcacccgcgcggatatcgatgcgacgggtctcatccgcgatggcaacacg
agcttttccggctcaggcacggcagccggattgtcttacgggacgctgttcatttcccag
cttgcagcccgcggcgaggtcgagaacggcgtcgggcgggtggatgcctcgctctcgggc
aggcgcagcgggcgcttcgtgctggatgcgaatgcgaccatccggcccgatcgcatcgcg
ctcgccgcacagggtcggtttgccggtcgccgcatttccatgccgcgccgcgccgtgctc
acaagtctggacagtggtggctggcgcctcgcaccgacgcaattctcctatggcgatggc
gggatgatcgtgtccggcgatttcggcggcagggatctcgatttcgatttcaagctcgcc
cgcatgccgctctccctgatcgatgtcgcgaaagccgataccggccttggcgggacgatt
tcgggcacggtccattatcgcaccggtgccgacatggtgccggtgggcgaagccaaggtg
aagatcgaagggctgacgcgctccggcctcgtgctgacgtcgcgcccggtaaacgtctcg
ctggtggcggaactgaccgaaagcgatcttcaggcgcgtgccctgttgcagaacgaggat
atccagcgcgggcgtgtgcaggcgcggatcaccggcctgccgcagcagggtatcctcatc
gaacggctgcgggcaggccgcctttcgggccagctacgctatcgcggcgcggcggaaagc
ctgtggcggctcgccgctctcgatacgttcgacataaccggccccatcgccatcgccgca
aatgcaaccggcacgttgcgcgatcccacggtgcgcggctccatctcgggcgacagcctg
caattgcgcagttcgctgtcgggcaccgacattcgcgatattgccatgcgcggccggttt
cagggatcgcgcctccagcttacgcgctttgccggtacggcggtcaacggcggcagcgtc
agcggcagcggcatcgtcgatctgcggaccctgggcgaaacggttcagggcagggtactg
gaaatccgcgggccgatcatcgatctgcgcgcctcggccaagaatgcgcgcctgctcgat
acgggtggcctcagcgccacggtcaccggaccgctgcggatcgtctcggacgggctcggc
gggacgattgcgggcaaggtccgcgtcaaccgggccagctggacgctgggcacggcggcc
gacgatctgcgtgtcccgcaaatcgccacgcgcgaaatcaatacgcccgccaaccgcgat
ccgcaggtggcggccggccggccctggcaatacctcatcaatgccaaggcgagcagccgg
atcgatgtcgatggcatgggactggacagcgaatgggctgcggacatcgtcctgcgcggc
aatacgtccgatccgcgcatcggcgggcgggcggaagtggttcgcggcaactacaccttt
gccggaacccgcttcgaactgacccgcggcgagatcgaattcgatgtggacgcgcccatc
gatcccctgctcgacattcgtgcggaaacggaccgggatggcctgaacgtcgaagcgaac
gtcaggggcagcgcgacgcagcccgaaatcaccttcacatccaacccctccctgcctgaa
gaggaactgctggcccgcctgctcttcggcggttcggtcaccagcctctcggcgaccgac
gctctgcagcttggcgcggccgtggccagtctgcgcggcgggggcggcatggacccgatc
aaccagttgcgctcggcgatcgggctcgatcgcctgcgtatcgtcagcgccgatcccgca
ctgggccgcggcacgggcgtcgcattgggcaagaatttcgggcgccgcttctacgcggaa
atcatcacggatggacgcggctacagcgctacggaagtggaattccgtgtgaccagctgg
ctgtcgctactcgctgccgtgtcgacggtcgggcgcgaaagcgtcgtcgccgaaatcagt
cgcgattactga
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