Qipengyuania citrea: NCF85_03705
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Entry
NCF85_03705 CDS
T08274
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
qci
Qipengyuania citrea
Brite
KEGG Orthology (KO) [BR:
qci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qci03032
]
NCF85_03705 (topA)
03400 DNA repair and recombination proteins [BR:
qci03400
]
NCF85_03705 (topA)
Enzymes [BR:
qci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCF85_03705 (topA)
DNA replication proteins [BR:
qci03032
]
Prokaryotic type
DNA Topoisomerases
NCF85_03705 (topA)
DNA repair and recombination proteins [BR:
qci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCF85_03705 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
USA62096
LinkDB
All DBs
Position
768217..770796
Genome browser
AA seq
859 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGKDFKVLASYGHVRDLPPKDGSVRPDEGFEMDWELYRDKQS
RFKEIADNAKKADRLILATDPDREGEAISWHVRELLQKRKALPKDVERVTFNAITKQAVT
DAMKAPRELDQDLIDAYLARRALDYLYGFTLSPVLWRRLPGAKSAGRVQSVALRLIVDRE
IEIEQFRADEYWSVIAKLQHDGTEFDARLVKFDGKKLEKLTLGDEGGAMAAKQAVEGANF
TVEEVETKPFKRNPAPPFTTSTLQQEAARKLGFSASHTMRLAQSLYEAGAITYMRTDGVG
MDGSAISACRKAIADRYGGHALPDSPRMYKTKAKNAQEAHEAIRPTDFDRDRAGSGDEGK
LYDLIFKRATASQMAAASLERTTVTMRDPTGQHELRATGQVVKYPGFLAVYQEGRDDADD
DEDGLLPTIAKGDAPLKRGVEANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQTL
RERNYVRMEKNRFFAEESGRLLTAFLERFFEQYVAFDYTAGLEDELDVVSDGKEDWKKLL
EAFWRDFKPKTEEVMDKKPSEVTEVLDGFLADYLFPERADGKDPRHCPLCESEGREGGRL
ALRGGRYGAFVACANYPECKYTRQFAKPGGADGDDGADDGVMGEDPETGLPVERKSGRFG
PYVQLGEGKEAKRASIPKDLDDFDLEWALKLLSLPRIVGAHPETGKEIEAAIGRYGPYLR
HDGKYGKLSSTQEVFDVGMNRAVDILAQAADRKGGGRGKAEPIKTLGEHPTSGGEMKVMP
GRYGPYVTDGTTNATIPKDMKPEDLTDAQAIELIDARVAKGPAKKKKAAPKKKAPAKKKA
APKKAAAKKKPAAQKAKAD
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtcatcgtcgaatcgcccgcgaaggcgaaaaccatcgagaaatacctcggc
aaggacttcaaggttctcgcttcctacggtcacgtccgcgacctgccgcccaaggacggc
agcgtgcgtccggacgaagggttcgagatggactgggagctttaccgggacaagcagagc
cgcttcaaggaaatcgccgataacgcgaagaaggccgatcgcttgatcctcgccaccgac
cctgaccgcgagggcgaggcgatttcatggcacgtgcgcgagctgctgcagaagcgcaag
gcgctgcccaaggatgtcgaacgcgtcaccttcaacgccatcaccaagcaggcggtgacc
gacgccatgaaggcgccgcgcgaactcgatcaggatctgatcgacgcctacctcgcgcgc
cgcgcgctcgattatctgtacggcttcacgctttcgcccgtgttgtggcgccgcctaccg
ggtgcaaagagcgcaggccgcgtgcaatcggtcgccctgcggctgatcgtcgatcgcgag
atcgaaatcgaacagttccgggccgacgaatactggtccgtcattgccaagctgcagcac
gacggaacggaattcgatgcgcgcctcgtcaagttcgatggcaagaagctcgaaaagctg
acgctgggcgatgaaggcggcgccatggctgccaagcaggcggtcgaaggcgcgaacttc
acggtcgaggaggtcgagaccaagccgttcaagcgcaatccggctcccccgttcaccacg
tcgaccctgcagcaggaagctgcgcgcaagctcggtttttccgccagccacacaatgcgt
ctggcccaatcgctctatgaagccggggcgatcacctacatgcgtaccgacggggtcggc
atggatggcagcgccatttccgcctgccgcaaggcgattgccgaccgctatggcggacac
gcgctgcccgacagcccgcgcatgtacaagaccaaggcgaagaacgcccaggaagcgcac
gaagccatccgcccgaccgatttcgaccgcgaccgcgccgggtcgggtgacgagggcaag
ctgtacgatcttattttcaagcgtgcgacggccagccagatggccgccgccagcctggaa
cgcacgaccgtgaccatgcgcgaccccaccggccagcacgaattgcgcgccaccggacag
gttgtgaaatatcccggcttccttgcggtctaccaggaaggccgcgacgatgcggacgat
gatgaggacggcctgcttccgaccatagccaagggcgatgcgccgctgaaacgcggggtc
gaggcgaaccagcacttcacgcagccaccgccgcgcttttccgaagccagcctggtcaag
cggctggaggaacttggcatcggtcgcccgtcgacttacgccagcacgatccagacgctg
cgcgagcgcaactatgtgcggatggaaaaaaaccgtttcttcgcagaggaatcgggccgg
ctgctgacggcgtttcttgagcggtttttcgagcaatatgtggccttcgattacaccgcg
ggcctggaagacgagctcgacgtcgtttccgacggcaaggaagactggaagaaactgctc
gaagccttctggcgcgatttcaagcccaagaccgaagaggtgatggacaagaagccttcg
gaagtgaccgaagtgctcgacggtttcctcgccgattatcttttccctgaacgcgccgac
ggcaaggatccccgccattgcccgctgtgcgaaagcgaaggccgcgaaggcggacggctg
gcgctgcgcggcggtcgctacggcgctttcgtcgcctgtgccaactatccggaatgcaag
tacacccgccaattcgccaagcccggcggcgcggatggcgatgacggcgcagacgacggc
gtgatgggcgaagaccccgaaaccggcctgccggtggagcgcaagagcggccgcttcggc
ccctatgtccagctgggcgagggcaaggaagcgaaacgcgcgagcatccccaaggatctg
gacgatttcgatctcgaatgggcgctcaagctgttgagcctgccgcgcatcgtcggagcg
catcccgaaaccggcaaggaaatcgaagccgcgataggacgttacggcccgtatcttcgc
catgatggcaagtatggcaagctgtcgtcgacgcaggaagtcttcgatgtcggcatgaac
cgcgcggtcgatatcctcgcccaggcggccgatcgcaagggcggcggtcgcggcaaggct
gaacccatcaagacgctgggcgaacatccgaccagcggcggcgaaatgaaggtcatgccg
ggtcgctatggcccctatgtgaccgatggcacgacgaacgcgaccatccccaaggacatg
aaacccgaagacctgaccgatgcgcaggcgatcgaactgatcgacgcgcgggtcgccaag
gggccggcgaaaaagaagaaggcggccccgaaaaagaaggccccggccaaaaagaaggct
gcacccaagaaagctgctgcgaagaaaaagccggcggcccagaaagcgaaggcagactga
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