Qipengyuania citrea: NCF85_04500
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Entry
NCF85_04500 CDS
T08274
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
qci
Qipengyuania citrea
Brite
KEGG Orthology (KO) [BR:
qci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qci03032
]
NCF85_04500
03400 DNA repair and recombination proteins [BR:
qci03400
]
NCF85_04500
Enzymes [BR:
qci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCF85_04500
DNA replication proteins [BR:
qci03032
]
Prokaryotic type
DNA Topoisomerases
NCF85_04500
DNA repair and recombination proteins [BR:
qci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCF85_04500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
USA62249
LinkDB
All DBs
Position
929884..930885
Genome browser
AA seq
333 aa
AA seq
DB search
MTKLIYVDDDLPGITRKGAGKGWAYYDPKGKLIGDAEEKRRLNAIALPPAYVDAWFCPAP
NGHILATGIDAKGRKQYRYHPDFRAAREGEKFDSCVTFGSLLPLVRKRVESDLRGHNLTR
ERAIASVVRLLDLGAIRVGNEGYAKANKSFGATTLRNRHAELTGKTLRLRYKGKGGKLQE
VTLSDGSLARMVRKMQDLPGQHLFKYVDDDGDQHTVGSSDVNEYLRETMGQDFTAKNFRT
WHASVRALTCVYEGDGKLPMKQLLECVADHLGNTPAVTRKSYIHPAVFEVLENQIEWREE
LRLPRGTRWLTREERGLIDLLQNSPSASTLLAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagctcatctatgtcgacgacgacctgcctggaatcacccgcaagggtgcgggg
aagggatgggcctattacgatcccaaaggtaagcttatcggcgatgcagaggaaaagcgc
aggctcaatgctatcgcccttccgccggcttatgtcgacgcctggttctgccccgcgccg
aatggtcatattctcgcgaccggcatagatgccaaaggccgcaaacaatatcggtatcac
ccggattttcgcgccgcgcgagaaggcgagaagttcgatagctgcgtcaccttcggcagt
ctgctgcccctcgtccgaaagcgtgtagaaagcgatctgcgcgggcataacctcaccaga
gagcgcgccatcgcaagcgtcgtgaggttgctcgaccttggtgcaatcagggttgggaac
gaggggtatgcaaaggccaacaagagtttcggtgccaccaccctccgtaatcgccatgcc
gaactgaccggaaagaccttgcggcttcgctacaaggggaagggcggcaagctgcaggag
gttaccctgtccgatggcagcctggcacgaatggtgcgcaaaatgcaggatctgccaggc
caacatctgttcaaatatgtcgatgacgatggcgaccagcacacggtcggatcgagtgac
gtcaacgagtatctgcgcgaaaccatggggcaggatttcaccgccaagaactttcgcacc
tggcacgcaagcgtcagggcgctgacctgcgtttatgagggcgatggcaagctgccgatg
aagcaactgctcgaatgcgtcgctgaccatctgggcaatacacccgcggtcacaagaaaa
agttatattcacccggcggtgttcgaagtgctcgaaaatcagatcgaatggcgcgaggaa
cttcgcctgccacgcgggacacgatggttaacacgcgaagaacgcggcctgatcgacctt
ctgcagaacagtcccagcgcgagcaccctgctcgccgcctag
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