Qipengyuania citrea: NCF85_04695
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Entry
NCF85_04695 CDS
T08274
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
qci
Qipengyuania citrea
Brite
KEGG Orthology (KO) [BR:
qci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qci03400
]
NCF85_04695 (addA)
Enzymes [BR:
qci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCF85_04695 (addA)
DNA repair and recombination proteins [BR:
qci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCF85_04695 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DUF2800
DEAD
Motif
Other DBs
NCBI-ProteinID:
USA62285
LinkDB
All DBs
Position
972579..976058
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AA seq
1159 aa
AA seq
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MSGQVYPLVGHQRDAVDPRESVWLSASAGTGKTQVLSARVLRLLLEPGADPSQILCLTFT
KAGAAEMAVRVNEVLARWVRLPDEVLAEELANLGSPTDPEIRSRARSLFARVLDCPGGGL
RIDTIHAFAQYLLAAFPNEAQILPGSQPMEDRDRDLLSLDVLAELLESGEPIVREAVAEM
SRRKGPDAVRGWLMKCAGDLDTWYQPDWQGDLTAPVRRMLDIPFDAGADWVAEACTDGEF
PVSALLACSRINAEWNTATGLKSADFAAGWLAASPAARLTEIDGFFGTLLTQKGEPKSLA
NLEKIDLAYGGYIADVVDGIASVAQRRALLNLADFLVPQLTAGRAFAFEWEAAKAREGLV
DFDDLIARAANLLSNAAMADWIRYKLDRSFDHILVDEAQDTNRAQWQIIEALTDDFFSGE
GARGNAVRTIFTVGDLKQAIFGFQGTSPKNFRDARDRFAESMRKTADAAADLRGGPHPRY
LREYGLGQSFRTADNVLDFVDSAIAAIGSEGLGLDREAEEHEGQSRPGMVTLWNLIHADS
GMEEGEVDEGWLGRHDRKLADRIAQQVRHWMDSGFPLVKDRHKGGPPRRAGPGDVMVLVR
KRRDLASLIVARLHRRGVPVAGVDRLRLGNPLAVKDLMAAIRFAAQPFDDLTLACVLVSP
LIGWSQDELLEYGHRAKNVRLWEHLRKSEAPRVGETMAILREILRRADFDTPQQLLHWIL
IGPMDGRRKLVARLGREANDPIDELLNAANAYAASHIASLQGFIQWFDAGEGEIKRDAGE
GGDQVRVMTVHGSKGLQAPIVVLADAAIGPDGARDLELEETPLGHVEPRRIPLPGLTKDQ
KVGRLQVAEERAAAAEMEEHWRLLYVAMTRAEEALFIGGSLGPRDVKRGQAHEDSWYARL
KPLFGNEPLADDLWGSRWEWGELTKEAPIESVSAAEPVTALPTWAVDPVGPEPRPPRPLA
PSGLGEVEGSDPPLPPTHAADAARRGTLIHALLERLPLVDEDDRNARGLSWLARQVPDLD
DHERADILERALTVLGDPQFAPVFGPQALAEIPLAAEVNGQVVMGTADRLLVTPEKVTVI
DFKTARRPPLSVDAIPDSTMKQMAAYAAALEVIYPGRQIEAAVLYTQTPQLFALPGERLA
AYKSAFAAPQESFVLPPVE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggccaggtttatccgctcgttggtcatcagcgcgacgcggtcgatccgcgggag
agcgtatggctctccgccagcgcaggtactggcaagacgcaggtgctctctgcgcgggtc
cttcgcctgttgctcgaaccgggcgctgatccttcgcaaatcctgtgtctgaccttcacc
aaggcgggggctgctgaaatggctgttcgcgtcaatgaagtcctcgcgcggtgggttcgc
ctgccggatgaagtgctggccgaggaactggccaatctgggctcgccgaccgatccggaa
atccgatcccgggcgcggtcgctgtttgcacgggttctcgactgtcccggtggcgggctg
aggatcgataccatccatgccttcgcccagtatctgctcgcagcgtttcccaatgaagcg
caaatcctgcccggcagccagccgatggaagatcgtgaccgggacctcttgagcctcgat
gttctcgctgaactcctcgaaagcggcgaaccgatcgtgcgcgaggcggtggcagagatg
agccgccgcaaggggccggatgccgtacgcggctggctgatgaaatgcgctggggatctc
gacacatggtaccagcccgactggcagggcgatctcactgcgccggtgcgccggatgcta
gacattccattcgatgctggagcagattgggtcgctgaagcctgcaccgatggtgaattt
cctgtcagcgctcttctggcttgcagtcgcatcaacgcggagtggaataccgccactggc
ctgaagagcgccgatttcgccgcgggatggctggccgcaagtcccgctgcccgtcttacc
gaaatcgatggcttcttcggcacattgcttacgcagaaaggcgagccgaagagcttggcc
aatctcgaaaagatcgatctcgcgtatggcggatatatagccgatgtcgtggacggtatt
gcctcagtcgcgcagcgtcgtgcgctgcttaaccttgccgattttctcgtaccccagctc
acggctggccgcgcatttgcttttgagtgggaggcggccaaggcgcgcgaagggcttgtc
gatttcgacgatcttattgcccgtgctgccaacctgctttctaacgcggcaatggctgac
tggatccgctacaagctggatcgcagtttcgaccatatcctcgtcgatgaagcgcaagat
accaatcgggcgcagtggcagatcatagaggctttgaccgacgatttcttcagcggcgag
ggcgcgcgtgggaatgcggtgcgcacgattttcaccgtcggcgatctcaaacaggcaatc
ttcggcttccagggcacaagcccgaagaatttcagggacgcccgggatcgtttcgcagaa
agcatgcggaaaacagcggacgcggctgccgacctgcgtggggggccgcatccgcgctat
ctgcgggaatatgggcttgggcaaagctttcgtaccgcggacaatgtactcgatttcgtc
gacagcgccattgccgcgatcggcagcgaaggattgggtctcgatagagaagcagaagag
cacgaaggtcaatcccgtcctggcatggtgaccctctggaacctgatccacgccgatagc
ggcatggaagaaggcgaggtcgacgaaggctggttgggacgtcacgatcgtaaattggcc
gaccgtatagcgcagcaggtgcggcactggatggattcgggctttcccttggtgaaagat
cgacacaagggtggtcctcctcggcgggctgggccgggggatgtcatggtgctcgtgcgc
aaacggcgcgatctggcttcgctcatagtagcgcgtcttcaccgccggggcgtacccgtc
gcaggcgtggacagattgcgattgggcaacccgctcgccgtcaaggatctgatggcagcc
atccggtttgcggcacagccgtttgacgacctgaccctcgcatgtgtgctcgtatcaccg
ctgatcggctggtctcaggacgaactgctcgaatatggccatcgcgccaagaatgtccgc
ctgtgggaacacttgcgtaaaagcgaagcgcctcgcgtcggggaaaccatggcaatcctg
cgcgagattctacgccgggcggatttcgacactccgcagcaattgcttcactggatcttg
atcggcccgatggatgggcgccggaagcttgtcgcgcggctggggcgtgaagcgaacgat
ccgatcgatgaattgctcaatgcggccaacgcctacgctgcaagtcatatcgcgagcctg
cagggctttatccaatggttcgacgctggcgagggcgaaatcaagcgagacgcaggcgag
ggcggagatcaggttcgcgtcatgacggtgcatggttcgaaagggctccaggcccccatc
gttgtactcgccgatgcggcaataggcccggacggcgcgcgcgatctcgaactggaggaa
acgccgctgggacacgtcgagccgcggcgtattcccttgccggggttgaccaaggaccag
aaagtcggccggttgcaagtcgcggaagagcgcgctgctgccgccgaaatggaagaacac
tggcgtctgctttacgtcgccatgacgagggcggaggaagcgctatttatcggagggtcg
ctcggtccccgcgacgtgaaacgtggccaggcgcacgaagatagctggtacgcacggctg
aagcctctcttcggcaatgagccgctagccgatgatctgtggggttcgcgttgggaatgg
ggcgaactgacgaaggaagccccgatcgaaagcgtatcggcggcagagcccgtcaccgca
cttcctacatgggcagtagatccagtcgggccggaaccgcgtccaccccggccacttgcc
ccgtcgggccttggtgaggtggagggaagcgatccgcccctgccgccaacacatgcagcc
gacgccgcccgcaggggcacgctgatccatgcgcttctcgaacgattgccgctggtggac
gaagacgatcgcaacgcgcgcggattatcctggctcgcgcggcaagtgcccgatctcgat
gaccatgaacgtgcggacattctcgagcgggcactgacggtattgggagatccgcagttt
gcaccggtcttcgggccgcaggctcttgccgaaatcccgcttgctgccgaagtgaatggg
caggtggtgatggggaccgccgaccggctcctcgtcacccccgaaaaggtcacggtcatc
gacttcaaaactgcgagacgtccgcccctatcggtcgatgccatccctgacagcacgatg
aagcagatggctgcatatgcggcggcgctggaggtgatataccccggccgccagatcgag
gccgccgttctctatacccagacaccgcagctcttcgccttgcccggcgaaagacttgcc
gcttacaagagcgcgtttgcggctccgcaggaaagttttgtgctgccgccagttgagtaa
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