Qipengyuania citrea: NCF85_12680
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Entry
NCF85_12680 CDS
T08274
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
qci
Qipengyuania citrea
Brite
KEGG Orthology (KO) [BR:
qci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NCF85_12680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qci03019
]
NCF85_12680
03009 Ribosome biogenesis [BR:
qci03009
]
NCF85_12680
04131 Membrane trafficking [BR:
qci04131
]
NCF85_12680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qci04147
]
NCF85_12680
Messenger RNA biogenesis [BR:
qci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NCF85_12680
Ribosome biogenesis [BR:
qci03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NCF85_12680
Membrane trafficking [BR:
qci04131
]
SNARE
SNARE associated proteins
Others
NCF85_12680
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NCF85_12680
Exosome [BR:
qci04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NCF85_12680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
CDC48_2
AAA_2
AAA_14
AAA_33
TIP49
IstB_IS21
AAA_7
nSTAND3
RNA_helicase
AAA_28
NPHP3_N
AAA_17
AAA_18
NACHT
AAA_lid_PRS2_C
Mg_chelatase
Sigma54_activat
AAA_3
TsaE
DUF815
Parvo_NS1
ABC_tran
AAA_24
AAA_11
Zeta_toxin
NB-ARC
PhoH
ATPase
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
USA62941
UniProt:
A0ABY4UAZ3
LinkDB
All DBs
Position
complement(2656778..2659105)
Genome browser
AA seq
775 aa
AA seq
DB search
MADADAATAVEEKTVRLQVAAARQEESGQGIARMPRSAFQALGITEGDVVEITGKRATAA
IAMAAYDEDQSLDVVRLDGLQRGNAQVGSGEHVNVVVAESRPATRVVFAPAQREMRLQGP
AQALKRNFFRKPLVAGDLVATTGQQPVQNMPPEVRRMFNAPAYALTQIRLSVVATTPKGI
VHIDENTEVELRAEFEPPRDARAVVNYDDVGGMGETIQQLREMVELPLRYPELFTRLGVD
PPKGVLLHGPPGTGKTRLAQAVANESDANFFTINGPEIMGSGYGDSEKALREVFEQATKA
APAIIFIDEIDSIAPKRDRVPGEAEKRLVAQLLTLMDGLEARSNLVVIAATNRPEAIDEA
LRRPGRFDREIVIGVPDESGRREILGIHTRGMPLGDRVDLNELAKATYGFVGADIAALAR
EAAIDAVRRIMPRIDLDERTIPPEVLDDLYVGREDFLSALKRIQPSAMREVMVQVPNVAW
SDVGGVGDAIGKLKEGIELPMKNPEAFHRLGIRPAQGFLLYGPPGTGKTLLAKAVAKEAK
ANFISMKSSDLLSKWYGESEQQIARMFKRARAVAPCVVFIDEIDSLVPARGSGQGEPQVT
GRVVNTILAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELVYVGTPDKGGREQIL
RIHAKDMPLADDVNLVDVASKTERFTGADLEDVVRRAGLNALHRAGGDVQEVTGADFTEA
LGDSRATVTSQMEAEYKKMQGELKKRAADVRPIGFVYEGMVESTRDEKHSPPAGD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcggatgctgcgacagcggtagaagaaaagacagtgagattgcaggtcgca
gcagcgcgacaggaagaaagcggccagggtatcgcgcgcatgccgcgttctgcttttcag
gcgctggggatcaccgagggcgatgtcgtcgagattaccggaaagcgcgcaactgctgcc
atcgccatggccgcttatgacgaagatcaaagtctcgatgtggtgcggctcgacggtctc
cagcgcgggaatgcgcaggtcgggtcgggcgaacatgtgaatgtggtcgtcgccgaatcg
cgccctgcgacccgggtcgtgtttgcgccggcgcagcgggaaatgcgtttgcagggcccg
gcgcaggcgctgaagcgcaacttcttcaggaaacctcttgtcgcgggtgaccttgttgcg
acgaccggacagcagccggttcagaatatgccaccggaagtgcgccgcatgttcaacgca
ccggcctatgccctcacgcagattcgcctgagcgtggtcgcgacgacacccaagggcatc
gtccatatcgacgagaatacagaggttgagctacgcgccgagttcgagccgccgcgcgat
gcgcgcgcggtcgtcaattatgacgatgtcggcggcatgggtgaaaccatccagcaattg
cgcgagatggtcgagttacccttgcgttacccagaattgttcacgcgcttgggtgtcgat
ccgcccaagggcgttttgctgcacggcccgccgggaacgggcaagacccggcttgctcag
gccgtcgccaatgaaagcgatgccaacttctttaccatcaacggtcccgagatcatggga
tcgggctatggcgacagcgaaaaagcgctgcgtgaagtgttcgagcaggcgacgaaggcg
gcaccggccatcatcttcatagacgagatcgattcgatcgcgccgaagagagatcgtgtg
ccaggcgaagcggaaaaacggcttgttgcgcagcttctgaccttgatggacgggctggaa
gcccgctcgaacctggtcgtgattgctgcgaccaaccggcctgaagcgatcgacgaggca
ttgcgcaggccaggacgcttcgaccgcgagattgtgatcggtgtgcccgacgaaagcggg
cgccgggaaattcttggcattcacacacgcggcatgccgctgggcgacagggtcgacctg
aacgaactggccaaggcgacttacggtttcgtcggggcagatattgcggcgcttgcgcga
gaagcagcgatcgacgcggtgaggcgcatcatgccgcgcatcgatctggacgaacgaacc
attccgcctgaagtgctcgacgacctatatgtaggccgcgaggatttcctctctgcgctg
aagcgtatccaaccaagcgccatgcgcgaagtcatggttcaggtgcccaatgtcgcatgg
tccgatgttggcggggtcggcgatgctatcggcaagctcaaggaaggcatcgagctgccg
atgaagaaccccgaggcgtttcatcgtctcggtatccggcctgctcagggctttttgctt
tatggacctcccggtacaggcaagaccttgctggcaaaggccgtcgccaaggaggcgaag
gcgaacttcatttcgatgaaaagttcggacttgctatcgaaatggtatggcgaaagcgaa
cagcagatcgcacggatgttcaaacgggccagggccgtcgcgccctgcgtcgtgttcatc
gacgagatcgacagtctggttccggcacgcggaagcgggcagggcgaaccccaggtgacc
gggcgggtagtgaataccattctggccgaaatggacgggctcgaagaattgcagtcggtg
gtggtgattggtgcgaccaatcgtcccactctggtcgatcctgcgctgctgcgcccgggc
cgcttcgacgaactggtttatgtcggaacacccgacaagggcggtcgcgaacagatcctg
cggatacacgcgaaggacatgccgctggctgacgacgtcaatctggtcgatgtagcttcg
aagaccgagcgctttaccggggcggacctggaagacgtggtgcgccgggcgggcctcaac
gcgctccaccgggcgggtggcgatgtgcaggaagtgaccggtgccgatttcaccgaggcc
ttgggagacagccgcgctaccgtgacgtctcagatggaagcggagtacaagaagatgcag
ggcgaactgaagaagcgcgctgcagatgtgcgaccgatcggcttcgtttacgaaggaatg
gtagaaagcacgcgtgacgagaagcactcgccgccggccggggactaa
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