Qipengyuania citrea: NCF85_13105
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Entry
NCF85_13105 CDS
T08274
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
qci
Qipengyuania citrea
Brite
KEGG Orthology (KO) [BR:
qci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qci03021
]
NCF85_13105
Transcription machinery [BR:
qci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCF85_13105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
KORA
HTH_Tnp_ISL3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
USA61006
LinkDB
All DBs
Position
complement(2743812..2744372)
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AA seq
186 aa
AA seq
DB search
MSGAGDNPDEALVSQVRAGNKRAFSKLVEHETGRLLALATRMLSSPSQAEDVVQDSLASV
WLTRHRLDPDKPIGPYLTTVVLNRCRDRLRRRKVAGFFGLSGDDELHSIADDLPGPEALA
VSREELNLVQAEIARMPVRLREALVLVTIEGRSQAEAADLLGTTEKAIETRVYRARNRLK
ERFEKL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggcgggcgacaatccggatgaggcccttgtctcgcaggtgagggccggtaac
aagcgggctttcagcaagctcgtcgagcatgaaaccggtcggcttctcgcgctcgcgaca
cgcatgctttcctctccttctcaggcggaggacgttgttcaggacagcctcgcttcggtg
tggctgacgcgccatcggctcgatccggacaagccgatcggaccctatctgacaaccgtc
gtcctcaaccgctgccgggaccgtttgcgcaggcgcaaggtcgcgggctttttcggactg
tcgggtgatgacgaactccattccatcgccgacgatttgccgggtcctgaagcgttggcc
gtttccagggaagagctcaatctcgttcaggccgagatcgcgcgaatgcctgtaaggctg
cgcgaagcgcttgtgctcgtgaccatcgaggggcgtagccaggccgaggcggccgatctt
ctcggaacgaccgaaaaggcgatcgaaacccgcgtataccgcgcgcgcaacagactaaag
gagcgcttcgaaaaactttga
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