Qipengyuania citrea: NCF85_15380
Help
Entry
NCF85_15380 CDS
T08274
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
qci
Qipengyuania citrea
Pathway
qci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCF85_15380 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qci03019
]
NCF85_15380 (recQ)
03400 DNA repair and recombination proteins [BR:
qci03400
]
NCF85_15380 (recQ)
Enzymes [BR:
qci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCF85_15380 (recQ)
Messenger RNA biogenesis [BR:
qci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCF85_15380 (recQ)
DNA repair and recombination proteins [BR:
qci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCF85_15380 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
USA63109
LinkDB
All DBs
Position
plas1:7986..9755
Genome browser
AA seq
589 aa
AA seq
DB search
MSGIAGAYQSLKDVFGFDGFRGRQEDVVTRILAGASTLAVMPTGAGKSLTYQLPAVMLPG
TCVVISPLIALMHDQLRSARANGIRAATLTSADADWRETQDAFRAGELDLLYVAPERASQ
PAFREFLSSAPLCLFAIDEAHCVSEWGHDFRPDYRMLRGLMDAFPQVPRLALTATADRQT
RADVMAQLGIAEDGLVLAGFDRPNIRYAIRHRDNPVRQLTNLMESEPGPGIVYAQTRRKV
EDLADKLAAATGRAVRPYHAGLDAQVRAANQSAFVASEDMVIVATVAFGMGIDKPDVRFV
AHVGVPKSIEGYYQETGRAGRDGDPSQAVMFWGAGDFATARQRLAEVDETRRAAERTRLD
ALAGLVETAECRRAVLLRHFGEHPPASCGNCDNCLEQPDVTDATELARKLLSAVYRTGQS
FGMGHLQKVLTGSEDERVRQRGHDQLSVFGIVEPAEAVMLQPLSRALQARGDLVANEHGG
LALGGSARAILKGESAVQIVVPPKRRRGRRGDMTPNPVGDPLFEALRALRKELAEDAQVP
PYVIFHDSTLREMAAARPATLDQLGRLPGIGAKKLEAYGDRFLRAIERH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggatcgcaggcgcatatcaatccttgaaagatgtcttcggcttcgacggattt
cgcggtcgacaggaggatgtcgtcacgcgcatcctggctggcgcatcgacgctggcggtg
atgccgaccggcgcggggaaatcgctgacctaccagctgcccgccgtgatgctgccgggt
acctgcgtggtgatcagcccgctgatcgcgctgatgcacgaccagcttcgcagcgcgcgc
gccaacggtattcgcgcggccacgctgaccagcgccgatgccgactggcgcgaaacgcag
gatgccttccgggccggcgagctggatcttctgtacgtcgcgccggaacgggcgagccag
ccggcctttcgcgaattcctgagttctgcgccgctgtgcctgttcgcgatcgacgaggcc
cactgcgtatccgaatggggccacgatttccgtcccgattaccggatgctgcgcggcctg
atggacgcttttccgcaggtgccgcggctggcgctgaccgcgacggcggatcgccagacg
cgcgccgatgtcatggcgcagctcggcatagcggaggacgggctggtactggcggggttc
gaccggcccaatatccgttacgcgatccgccatcgcgacaatccggtgcggcagctgacc
aatctgatggaaagcgagccggggccggggatcgtctatgcccagacccggcgcaaggtc
gaggatctggcggacaagctggcagcggcgaccgggcgggccgtgcggccctatcacgca
gggctggacgcgcaggtgcgcgctgcgaaccagagcgccttcgttgccagcgaggacatg
gtgatcgtggctacggtcgccttcggcatggggatcgacaagccggacgtgcgcttcgtc
gcccatgtcggcgtgcccaagtccatcgaaggctattaccaggaaacgggccgtgccggc
cgcgacggcgatcccagtcaggcggtcatgttctggggtgcgggggatttcgccaccgcg
cgccagcggctggccgaggtggacgagacgcgccgggcggcagagcgtacgcggctcgac
gcgctggcgggactggtggagacggccgaatgccgcagggccgtgctgctgcggcatttc
ggcgaacacccgccggcaagctgcggcaattgcgacaattgcctggagcagcccgatgta
accgatgcgaccgaactggcgcgcaagctgctgtcggcggtctatcgcaccggacagagc
ttcggcatggggcatctgcagaaggtactgaccgggagcgaagacgagcgggtgcgccag
cgcggccatgaccagctgagcgtgttcggcatcgtcgaaccggcagaagccgtcatgctg
cagccgctgtcccgggccttgcaggcgcgcggcgacctggtggccaacgagcatggcggg
ctggcgctgggcggatcggcccgcgccatcctgaagggggaaagcgcggtacagatcgtg
gtgccgcccaagcgcaggcgcgggcggcgcggcgacatgacgcccaacccggtcggggat
cccctgttcgaggccctgcgcgccctgcgcaaggaactggccgaggatgcacaggtgccg
ccctatgtcatcttccacgattcaaccctgcgcgagatggcggcggcacgaccggccacg
ctcgaccagcttggccggttgccgggcatcggcgccaagaagctggaagcctatggcgac
cgctttctccgcgcaatcgagcgccattga
DBGET
integrated database retrieval system
