Qiania dongpingensis: H9Q78_04135
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Entry
H9Q78_04135 CDS
T08121
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
qdo
Qiania dongpingensis
Brite
KEGG Orthology (KO) [BR:
qdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qdo03009
]
H9Q78_04135 (rlmD)
Enzymes [BR:
qdo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H9Q78_04135 (rlmD)
Ribosome biogenesis [BR:
qdo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9Q78_04135 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
Methyltransf_25
Methyltransf_15
MTS
PrmA
Methyltransf_4
TRM5-TYW2_MTfase
N6_N4_Mtase
Methyltransf_12
Methyltransf_11
UPF0020
PCMT
Motif
Other DBs
NCBI-ProteinID:
QNM06333
UniProt:
A0A7G9G6A1
LinkDB
All DBs
Position
complement(887571..888929)
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AA seq
452 aa
AA seq
DB search
MSQLKGEKWNKQLKASDAKGKETPGNKIHGKKTGLGETFSERKGKPNTGKIKSVFSKDSH
AAAAGGGCREDKGPFCPASKKCGGCEYQGISYEEQLHRKQKMVESLLKGICRVHPIIGMK
DPFHYRNKVHAVFDRKKDGTVISGVYEKNSHRVVPIDGCLIEDEQADAIIRDIRGLLKSF
KIRIYDEDTGYGLLRHVLIRRGFTSGEVLVVLVLSSPILPSKNNFVKALRELHPEITTVV
LNVNDKKTSMVLGEREITLYGKGYIEDTLCGKVFRISPRSFYQVNPVQTEVLYGKAIELA
GLTGKERVIDAYCGIGTIGLTASSLASEVIGVELSKEAVRDAIANAKRNDVKNIRFYQND
AGEFMTGMAEQGEHADVVFMDPPRAGSDEAFLSSVLRLAPKKIVYISCNPETLARDLKYL
ARGGYRAEGAWPVDMFPWTGHVEVCVELQRKQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttaaagggcgaaaagtggaataaacagttaaaagcttcggatgcgaaaggg
aaggaaacaccgggaaataagattcatggtaaaaagacgggattaggagaaacgttttca
gagcgaaaagggaaaccgaatactggtaagattaagtctgttttttcaaaagacagccat
gcggctgcagccggcggtggctgcagggaggataagggaccgttctgcccggcctcaaag
aaatgcggcggctgtgaatatcaggggatttcttatgaggagcagctgcatagaaagcag
aaaatggtggaatctctgttaaagggaatctgccgggttcatcccataatcggaatgaaa
gatcccttccattaccgaaacaaagtacatgcggtttttgaccggaaaaaagacgggacg
gtcatttctggtgtctatgaaaaaaacagccacagagtcgttcccatagatggctgcctc
attgaggacgagcaggcggacgcaatcatccgggatatccgtgggctgttaaaatccttt
aagattcgaatatatgatgaagacaccggctatggccttcttcgccatgttctgatcagg
cggggctttaccagcggagaggtgctggtggtcctggtgctgtcatctccgattttgcca
tctaaaaataactttgtgaaagcccttcgggaactccatccggaaatcacgactgttgtg
ctgaacgtcaatgataagaagaccagcatggtactgggagaacgggagatcactctttac
ggaaaaggatatattgaagatactctttgcggaaaagtattccggatttcccccagatcc
ttttatcaggtaaaccccgtccagacagaggttctctacggcaaggcaattgaattggcc
ggcctgacaggaaaagaacgtgttatcgatgcgtactgcggaatcgggacaatcgggctg
acggccagcagtctggccagcgaggtcataggggtagagctcagcaaagaagcggtccgg
gatgccattgcgaatgccaaacgtaacgatgtgaaaaatatccgtttttaccagaatgac
gcaggagaattcatgaccgggatggcagaacagggggaacatgccgatgtggtgtttatg
gaccctcccagggcaggaagcgacgaggcatttttatcctccgttttgcggctggctccg
aaaaagatcgtctatatctcatgtaatccggagacgctggcgcgggaccttaaatatctg
gcgcggggaggataccgggcagaaggagcatggccggtggatatgtttccgtggacagga
catgtggaggtttgtgttgaattacaacggaaacagtaa
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