Qiania dongpingensis: H9Q78_09495
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Entry
H9Q78_09495 CDS
T08121
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
qdo
Qiania dongpingensis
Brite
KEGG Orthology (KO) [BR:
qdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qdo03009
]
H9Q78_09495 (rlmD)
Enzymes [BR:
qdo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H9Q78_09495 (rlmD)
Ribosome biogenesis [BR:
qdo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9Q78_09495 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
TRAM
Cons_hypoth95
Methyltransf_11
PrmA
Methyltransf_15
UPF0020
Methyltrans_SAM
Methyltransf_12
Ubie_methyltran
RrnaAD
PCMT
TPMT
Methyltransf_4
TRM
DOT1
Motif
Other DBs
NCBI-ProteinID:
QNM07032
UniProt:
A0A7G9G8A0
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All DBs
Position
2035022..2036410
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AA seq
462 aa
AA seq
DB search
MNEQGEGIGRVNGYTLFIKDAVIGDRIEGKVVKAKKHYGYGRVLSILEPSPFRVTPRCPA
AAPCGGCQLQAMSYERQLQFKEDKVRNHLVRIGGFSEDSLPMEPILGMEIGEEPFSEKET
RGETGGSGPFHYRNKGQFPFGRAKDGRIVYGFYAGRTHSIVEAEGCCLGAPVCEKILQTI
KRFMEEYHIEPYNEETHSGLIRHALIRTGYHTGEIMVCLVINGDRLPRAQVLTDRLMEIK
GMASVSVNINRERTNVILGEKVVCLSGLPYITDRIGALTYKISPQSFYQVNPVQTEKLYG
KVLEYAGLTGSETVWDLYCGIGTISLFLAQRAKQVFGVEIVPAAIENARENAKLNGIPNT
EFFVGKAEEVVPRWYEEHEEASVDVIVVDPPRKGCDETLLKTMVQMRPGKIIYVSCDSAT
LARDLKYLCEEAYRVEKVQPVDMFPQGVHCEVCVELGRNKTI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacagggagagggtataggcagagtcaatggctataccctttttattaaggat
gcggtcatcggagaccgtatcgagggaaaagtggtgaaagccaaaaagcactatggctat
ggccgcgtgctgtccattttggagccgtccccctttcgggtgacgcctagatgtcccgcc
gctgcgccctgcgggggatgccagcttcaggcgatgtcctatgaaagacagcttcagttt
aaggaggataaggttcggaatcatctggtacgcatcgggggcttttcagaggacagcctt
cccatggagccgatattgggaatggaaataggagaagaacccttttcagaaaaagagact
cggggagaaaccgggggaagcggcccctttcattaccggaacaagggacaatttcctttt
ggtagggcaaaggacgggagaatcgtctatggcttttatgcaggccggactcactccatt
gtcgaagcagagggatgctgtctgggagcgccggtctgcgaaaagatcctgcagaccata
aagaggttcatggaagagtatcatattgaaccctataatgaagaaacgcattccggtctg
atacgccacgccttgattcggacaggttatcacaccggggagatcatggtctgcctggtc
atcaacggagaccgccttccccgcgcgcaggttttgacggatcggctgatggaaataaag
gggatggcctcggtatctgtcaatatcaatcgggaaaggaccaatgtaatattgggagag
aaggtggtctgcctgtcaggcctgccttatatcaccgaccggatcggcgccctcacttat
aagatttctccacagtccttttaccaggtgaaccctgtccaaacggagaagctttatggg
aaagtcctggagtacgccggcctgacaggttcggagaccgtatgggatctgtactgcggt
atcggcaccatctccctgtttctggcacagagggcaaaacaggtattcggggtggagatc
gtaccggcagccatagaaaatgcccgggaaaatgcgaagcttaacggtattccgaatacg
gaattctttgtgggaaaggctgaggaagtagtgccccggtggtatgaggagcatgaggag
gcctctgtggacgtcattgttgtggatccgcccaggaaaggctgtgacgagacactttta
aagaccatggtccagatgaggccagggaagatcatctatgtgtcctgcgactccgccacc
ttggcgagggatctgaaatatttgtgcgaagaagcgtacagggtggagaaagtacagccg
gtggatatgttcccgcagggggtacactgcgaggtctgcgtggaactgggaagaaacaaa
actatctga
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