Qiania dongpingensis: H9Q78_13575
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Entry
H9Q78_13575 CDS
T08121
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
qdo
Qiania dongpingensis
Pathway
qdo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
qdo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H9Q78_13575 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qdo03021
]
H9Q78_13575 (rpoD)
Transcription machinery [BR:
qdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9Q78_13575 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QNM05443
UniProt:
A0A7G9G3R1
LinkDB
All DBs
Position
2896805..2897932
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AA seq
375 aa
AA seq
DB search
MEKGKFSEDLLKLVELGKSKKSTLDMNDINDFFAGADLTVEQIEDIITYLENNGIDVLRV
MNDELTIDEDMVLDADDDAFTLEEEEEEEIDLDAIDFLDGIGTEDPVRMYLKEIGTVPLL
TAEEELKLAKRKAEGDQVAKERLIEANLRLVVSIAKRYTGRGMSFLDLVQEGNLGLIKGV
EKFDYTKGYKLSTYATWWIRQSVTRALADQARTIRVPVHMVETINKMSKMQRKLTLELGY
EPSVTELAGALDMTEEKVMEIMQIAREPASLETPIGEEDDSNLGDFVADSNAVTPEGNVE
SVMLREHIDTLLEDLKERERQVIVLRFGLEDGHPRTLEEVGKEFNVTRERIRQIEAKALR
KLRNPVRSKRIRDFL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaggaaagtttagtgaagatttactgaaacttgtagaactgggtaagagcaag
aagtccactctggatatgaatgatatcaatgactttttcgcgggagcggatctgaccgtt
gagcagattgaagatatcattacatacctcgagaacaatgggatagacgtactgcgcgtg
atgaatgatgaactgaccatcgatgaagacatggtcctggacgcggatgatgacgctttc
acattggaagaagaagaggaagaagagattgacttggatgccattgattttctggatggc
atcggtacggaagatccggttcggatgtatctgaaggaaattggcacagtcccgctgttg
acggcagaagaagaactgaaactggcgaaacgaaaggcggaaggagaccaggtggcgaag
gaacgtctgatcgaggcgaacctgaggctggtggtcagcattgctaaacgctatacgggc
cgcggtatgagctttctggatctggtccaggaaggaaacctggggcttataaagggcgtt
gaaaaatttgattatacaaaagggtacaagctcagtacctatgcgacgtggtggatccgg
caatcggtgacaagggcgctggcagatcaggccaggactatccgtgttccggtacatatg
gtggaaaccatcaacaaaatgtcgaagatgcagaggaagctgactcttgagctgggatat
gagccctcagtgaccgagctggcgggcgctctggatatgacggaagagaaagtcatggag
atcatgcagattgccagagaaccggcctccttggaaactcccatcggagaagaggacgat
tccaatctgggggatttcgttgcggacagcaatgcggtcacaccagaaggaaatgtggaa
tctgtgatgctcagagaacatattgatacgcttctggaggatttaaaggaaagggagcgc
caggtcatcgtcctgcgcttcggcttggaagacgggcatccccgtactctggaggaggtt
ggcaaggagttcaatgtcaccagggagcgcatccggcagatagaggcgaaagccctcagg
aagctgcgtaatcctgtgaggagcaagcgtatcagagattttctgtag
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