Qiania dongpingensis: H9Q78_13955
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Entry
H9Q78_13955 CDS
T08121
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
qdo
Qiania dongpingensis
Pathway
qdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9Q78_13955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qdo03019
]
H9Q78_13955
03009 Ribosome biogenesis [BR:
qdo03009
]
H9Q78_13955
Enzymes [BR:
qdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9Q78_13955
Messenger RNA biogenesis [BR:
qdo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9Q78_13955
Ribosome biogenesis [BR:
qdo03009
]
Prokaryotic type
rRNA helicases
H9Q78_13955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Cas3-like_C_2
Helicase_RecD
WSD
Motif
Other DBs
NCBI-ProteinID:
QNM05514
UniProt:
A0A7G9G3Y2
LinkDB
All DBs
Position
complement(2974917..2976377)
Genome browser
AA seq
486 aa
AA seq
DB search
MNFNELNLRKEILRAISDMGYTEATDIQGAAIPSILEGRDVTGRSSTGTGKTAAFGIPIV
QKTADNTDKASVLILSPTRELAVQITDEIRKYAKYLSNISVAAVYGGESMTNQIRMLKTA
RIVVGTPGRVMDHLRRKTLKLDHLQTVVLDEADEMLNMGFIDDIRCILESAPNEHQTILF
SATLPPAIMKITEDFQTDTIIVKADKGQRTVSSIEQNYYLIPKERKDDALKLLLEYYRPK
RALVFCNTKKMVDELSESLCESGFRAAGLHGDLKQSQRNIVMREFKSGRSGILVATDVAA
RGIDVDDVEAVFNYDIPQENEYYIHRIGRTGRAGKSGSSHTLVTNRKQLMQLREIERYVG
MSIREKPIPTLESIAASGTAELADIIRRQVGKGIDQQYLALVSQLKEEGYSPETVAAALC
ERLQKKNKRLSSVQDVYPLVLGREKESRRRKPRYDNRDYGKKEFPKGFKGKKDGGHGKRR
GPRFDY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaacgaactgaatttacgaaaagaaatcctgcgggcaatctcagatatggga
tatacggaagccaccgatatccagggagcagccattccctccatattagagggccgggac
gtcacaggacgttccagcaccggcacaggcaaaactgccgcattcggcatccccattgtc
cagaagaccgcagataacacggacaaggccagcgttttgattttatctcccaccagggaa
ctggcggtccagataaccgatgagattcgcaaatatgccaaatatttgtccaatatttcc
gtcgccgccgtatacggaggcgaatccatgaccaaccagatccggatgctgaaaaccgcg
cggattgtcgtgggaactccgggccgggtgatggaccatctccgccgcaagactctgaag
cttgaccatcttcagaccgtggttctggatgaagccgatgaaatgctcaatatgggcttc
attgacgacatccgctgcatcctggaaagcgctccgaatgaacatcagactattcttttc
agcgctactcttccgccggcgatcatgaagatcaccgaagacttccagacagacacgatc
attgtcaaggcagacaaaggacagcggaccgtttccagtatcgagcagaactattatctc
ataccaaaagaacgtaaggacgacgcgctaaagcttctcctggaatattaccgtcccaaa
cgggcgctggtgttctgcaatacaaaaaagatggttgatgagctgtccgaatccctctgt
gaatccggtttccgcgcagcaggtctccacggcgacctgaaacagagccagagaaatatc
gtcatgagagaattcaagtccggacggagcggtatcctggtggccacagacgtagcggcg
aggggtatcgatgtggatgatgtggaagctgtctttaattatgacattcctcaggaaaat
gaatactacatccaccgtatcggccgaacagggcgcgcaggcaaatccggttccagccat
acgctggtcacgaaccgcaaacagctcatgcagctgcgggaaatcgaacggtacgtcggg
atgtccatcagggaaaaaccgattccaacgctcgagagcattgccgcttccggcactgct
gaattggccgatatcatccgccgacaggtaggcaagggcattgaccagcagtacctcgct
cttgtcagccagctgaaggaagaaggatactctccggaaacggttgccgctgctctctgc
gaacggcttcagaaaaagaacaagcgtctctcttctgtccaggatgtctatcctctggtg
cttggaagagaaaaggaatcccgcaggcgcaaaccgcggtatgacaacagggattatggg
aaaaaggaattccccaagggcttcaaaggaaaaaaagacggcgggcacggtaaacgccgg
ggaccgagatttgattactaa
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