Qiania dongpingensis: H9Q78_14040
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Entry
H9Q78_14040 CDS
T08121
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
qdo
Qiania dongpingensis
Pathway
qdo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
qdo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H9Q78_14040 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qdo03021
]
H9Q78_14040 (rpoD)
Transcription machinery [BR:
qdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9Q78_14040 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
Exonuc_VII_L
Chap-C
DUF6604
Motif
Other DBs
NCBI-ProteinID:
QNM05530
UniProt:
A0A7G9G3Z8
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All DBs
Position
2997550..2998653
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AA seq
367 aa
AA seq
DB search
MEAVGLRLEDKLAKLLKLAAQRKNTLDYQDIMEVLGDDSLNADCIDKTFQVLEAGGVEVR
SEIAEEELLFLSDEEGDKTETEFQETVNIEGPSSEDPVRMYLKEIGKIPLLTTGEELSLA
KRIEEGDEEAGRRLAEANLRLVVSIAKRYAGRGMQFLDLIQEGNLGLMKAVEKFDYKKGY
KFSTYATWWIRQAITRAIADQGRTIRIPVHMVETINRVIRTSRQLLQEYGRDPKPDEIAE
RMNLPEERVREIMKFSMEPVSLETPVGEEEDSHLADFIQDESIQVPAEAAAFSMLREQLG
EVLHTLTDRERQVLCMRFGLIDGEGRTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSK
KLKDYLE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggtggggctccggctggaggacaagctggctaagcttttgaagctggcggca
cagaggaaaaataccttggattaccaggacatcatggaagtgcttggagatgacagcctg
aatgcggactgtatcgacaagacgtttcaggtgctggaggccggaggcgtggaagtacgc
agtgaaatagcagaagaagagcttcttttcctttcggatgaggaaggagacaaaacagag
acggaatttcaggagacggtgaatatagaagggccttcgtcagaggacccggttcggatg
tatctgaaggagattgggaagattcctcttttgacgacgggagaagagctttctcttgca
aagaggatcgaagagggagatgaagaagccggaagacgtctggctgaagcgaatctcaga
cttgtcgtgagcatcgcgaagcgatacgcggggcgcggcatgcagtttctggatttgatc
caggagggaaatctggggctcatgaaagccgtggaaaagtttgactataaaaagggatat
aagttcagcacttacgcaacctggtggatcaggcaggcgattacaagggccatagccgac
cagggcaggacgatccgcataccggtccatatggtcgagacgatcaaccgggtgatccgc
acatccagacagcttttacaggaatacggaagggatcctaagcccgatgagattgcagaa
cggatgaacctacccgaggagcgggtaagggagatcatgaagttttccatggagccggtc
tctctggaaactccggtgggggaagaagaagacagccatctggcggatttcatacaggat
gagagcatccaggttcccgccgaggcggccgcgttcagcatgctgagagaacagctgggg
gaggtcctccatacattgacagacagagagcggcaagttctgtgtatgcgtttcggactg
atcgatggtgaggggcggaccctggaagaagtgggaaaagaatttaatgtgacaagagag
cggatccggcagattgaagcaaaggctctccggaagctgagacatccaagcaggagcaaa
aagcttaaggattatctggaatag
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