Qipengyuania gelatinilytica: K3136_00010
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Entry
K3136_00010 CDS
T09826
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
qge
Qipengyuania gelatinilytica
Pathway
qge03410
Base excision repair
qge03430
Mismatch repair
qge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3136_00010 (recJ)
03430 Mismatch repair
K3136_00010 (recJ)
03440 Homologous recombination
K3136_00010 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qge03400
]
K3136_00010 (recJ)
DNA repair and recombination proteins [BR:
qge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K3136_00010 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K3136_00010 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K3136_00010 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
DUF2529
Mobilization_B
Motif
Other DBs
NCBI-ProteinID:
QZD95157
LinkDB
All DBs
Position
complement(161..1945)
Genome browser
AA seq
594 aa
AA seq
DB search
MATTALPHVYGVSQSLTGRAWRWRGGNMDLGQGHVGDDEAIVRQLLLARGVAAEDVPRHL
TPTLREFLPDPSEFNDMETAADRIAQAILSREKITIYGDYDVDGATSSALLIRLLRELGV
DADYYIPDRLLEGYGPSGEALVKLGESGSSLIVTVDCGAMAHEALAMASDAGIDVIVVDH
HKCSPELPRAAALVNPNRLDENDLAAAHGHLAAVGVAFLLAIALVRTLRARGFFEDRKEP
DLFALLDIVALGTVADVAALHGLNRAFVAQGLKVMGRRDNIGMSALIDASRLKRAPICSD
LGFALGPRINAGGRVGESTLGVRLLTTEDAEEAREIAAQLSALNEERRAIEAEVQQAAEE
QLAGQHNRAVHVVAARGWHPGVIGIVAGRIKEKTGKPSLVIALDETGEGKGSGRSIAGVD
LGAAIIRAREEGLLVKGGGHAMAAGLTVEESRLEDFADWLDTHLEAAVSRADANREMLLD
LAVAPGGLTPALVDALERGGPYGMGWPGPRVAVGPVRLVKCDIVGTDHVRLIASGDDGKS
FKGIAFRAADSDMGQALLHGSRGRRLWLAGRVKIDDWGSRPQAELHLEDAAFAD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaccgcacttcctcacgtctatggcgtatcgcagtcgcttaccggacgcgca
tggcgctggcggggcggcaatatggaccttggtcagggccacgtgggcgacgacgaggcc
atcgtccgccagctgctgttggcgcgcggtgtcgctgccgaggatgtgccgcgccacctc
acgccgaccttgcgcgaattcctgcccgacccgtccgagttcaacgatatggagaccgcg
gcagatcgtatcgcccaggcgatcctgagccgggaaaagatcacgatctacggcgattac
gacgtcgatggtgccaccagttccgcgttgctgatccgccttctgcgagagcttggcgtg
gatgccgactactacattcccgaccgccttctcgaaggctacggcccgtcgggagaggcg
ttggtcaagcttggcgagagcgggtcgagcctgatcgtgaccgtcgactgcggcgcgatg
gcgcacgaggcgctcgcgatggcgagcgacgccgggatcgatgtgatcgtggtcgatcac
cacaagtgctcaccggagcttccaagggcagcggcactggtcaatcccaaccgcctcgac
gagaacgacctcgctgcggcgcacgggcatcttgcggcagtcggcgtggccttcctgttg
gcgattgcgcttgttcgcaccttgcgtgcgcgagggttcttcgaggaccgcaaggagccc
gacctgtttgcgctgctggacattgtcgccctgggcaccgtggccgatgtggcggccctg
cacggtctcaaccgcgcattcgtggcgcagggtctcaaggtcatgggccggcgggacaat
atcggcatgtctgcccttatcgacgccagccgcctgaagcgggcaccgatctgttcggac
ctcggctttgcgcttggtccgcggatcaatgccggtggccgggtcggcgaatcgacgctc
ggcgtccgcctgctgaccaccgaggatgcagaggaagcgcgcgagatcgctgcgcaattg
tccgctctcaacgaggaacgccgggctatcgaggccgaggtgcagcaagcggcggaagag
cagctggccggccagcacaaccgtgcagtccacgtggtggcggcgcgcggttggcatccg
ggcgtaatcggtatcgtcgccggacggatcaaggaaaagaccggcaaaccgtctctcgtc
attgcgctcgacgagaccggcgaaggaaagggttcgggccgctcgatcgccggtgtcgac
ctcggtgctgcgatcatccgagctcgcgaggaaggcctactcgtcaaaggcggcggccac
gcgatggctgcaggcctgacagtcgaagaatcgcgcctcgaggattttgccgactggctc
gatacgcatctcgaagcagcggtttctcgcgcagacgccaatcgcgagatgctgctcgac
ctcgcagttgcgccaggcgggcttacccccgcgctggtcgatgcgctcgaacggggcggc
ccctatggaatgggttggccgggaccgcgcgttgcagtcggtcccgtcaggctggtgaag
tgcgatatcgtcggcaccgaccacgtccggctgattgccagcggggacgatggcaagagc
ttcaagggaatcgccttccgcgctgcggacagcgacatggggcaggctttgctgcatgga
tcgcgcgggcgcaggctgtggctggcaggccgtgtgaagatcgacgactggggcagccgt
ccgcaggccgaactgcaccttgaagacgctgcatttgcagattga
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