Qipengyuania gelatinilytica: K3136_02405
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Entry
K3136_02405 CDS
T09826
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
qge
Qipengyuania gelatinilytica
Brite
KEGG Orthology (KO) [BR:
qge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qge03016
]
K3136_02405 (thpR)
Enzymes [BR:
qge01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
K3136_02405 (thpR)
Transfer RNA biogenesis [BR:
qge03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
K3136_02405 (thpR)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QZD95600
LinkDB
All DBs
Position
498414..498956
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AA seq
180 aa
AA seq
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MTHRLFVAIRPPEAIRDALIDLMDGVDNARWQYEDQLHLTLRYVGETDPHTADDLVEALA
EIRIEPFELRVSGVDFFERKGVPHTLWAGIAPSEPLLRLQRKVERACTSVGLAPETRKFA
PHITMARLNASCGPSAPFLARNTGLSLGPWQVDDYILYESHLRPQGSLYEPIVTYRCKDP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcgcctttttgtcgccatccgcccgcccgaggccattcgcgatgcgttgatc
gaccttatggacggcgtcgacaacgcccgctggcagtacgaggaccagctccatcttacg
ctgcggtacgtcggtgaaaccgacccccacacagcggacgaccttgtcgaggctctcgcc
gagatccgcattgagcctttcgagcttcgcgtgagcggggtcgatttcttcgaacgcaag
ggcgtgccacatacgctgtgggcagggatcgcgcccagtgagcccctgctgcgcctgcaa
cgcaaggtcgagcgcgcctgcacatcggtcggacttgcgccggaaacgcgcaagttcgcg
ccccatatcaccatggcccggctcaatgcctcctgcggtccttcggccccgttccttgca
cggaacacggggctttcgcttggaccgtggcaggttgacgactacatcctgtatgagagc
caccttcgcccgcagggatcgctttacgaacccatcgtcacttatcgctgcaaggaccca
tga
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