Qipengyuania gelatinilytica: K3136_03580
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Entry
K3136_03580 CDS
T09826
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
qge
Qipengyuania gelatinilytica
Brite
KEGG Orthology (KO) [BR:
qge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qge03019
]
K3136_03580 (hrpB)
Enzymes [BR:
qge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
K3136_03580 (hrpB)
Messenger RNA biogenesis [BR:
qge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K3136_03580 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
AAA_30
Flavi_DEAD
AAA_19
Cas3-like_C_2
ResIII
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QZD95812
LinkDB
All DBs
Position
complement(729219..731645)
Genome browser
AA seq
808 aa
AA seq
DB search
MTETLPIHDVLPDLLAALSEASAAVLVAPPGAGKTTAVAPALIGEDWCDGMVILTSPRRV
AARATAERMAQMLGEKPGETIGYLTRLDTKRSANTRVLVVTEAIFVNMILDDPELERASA
VLIDEAHERHLDTDFGLALALESRGVLREDLRVLVMSATIDGARFASLMGEGTPVIESEG
RAYPLDIRWLGSAPQERIEDAMAAAIATAWREEEGDILAFLPGVGEIERTRERVEARLPK
ALVLPLHGQVQPADQRAAIRKDPEGRRRIVLATAIAETSLTLDGVSVVVDAGLSRRAEFD
RAAGTTHLVTHRASQAAAAQRAGRAARQGPGVAYRLWEEGGHAGRPSYDPAEMEIADLAP
LVLDLAKWGTGDPASLQWLDTPPAASISAARQTLRALGALGEDGRITPRGAQLASLPLDP
ASAAMVLFGAERGDAQTAARLALLLQERGLGGRGEDLEARLQRWNSDRGARAEASRKLAG
RWAKQAEALVERKGSEDVPPAVLLAAGRPDFIAKRRDASGENWIASGGRGFILDPASPLA
RAEFLVIGDAQGQAKGARITAAIALEESELTAWLGERIERRSVLRWKNGRVEARLERRLG
AITLASGSDAEPDSQAVVDMLVDKVLENPAKLLPAELLARAAFIGLDSFSAARLAETADI
WLAPLLAGRRDLDIPKGRLVDALLGGLDWNDRQRLDAEAPREFTSPAGTTHPIDYTGDDA
PSVEVRVQALFGLERHPMVGKTPLLLKLTSPAGRPIQSTRDLPGFWRGSWADVRKDMKGR
YPKHRWPEEPWAEKPSLKTKNAFSKSGG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaccctgccgattcacgatgtcctacccgacctgctcgccgccttgtccgaa
gcgagtgcggcggtgctcgtcgcgcctcccggggccggcaagacgacggctgtcgcgcct
gccctgatcggggaagactggtgcgatggcatggtcatcctcacttcgccccgccgcgtg
gccgcacgcgctacggcggagcgcatggcccagatgctcggcgaaaagccaggtgagacg
atcggctacctgacgcgcctcgatacgaagcgttcggcaaacacgcgcgttctggtcgtg
accgaggcgatcttcgtgaacatgatcctcgacgatcctgaactggaacgcgcgtccgcg
gtgctgatcgacgaggcgcacgagcgacacctcgacaccgatttcggccttgcgcttgcc
ctcgaaagccgaggcgtgctgcgcgaagacctgcgcgtgctggtcatgtcggcgacgatc
gacggtgcgcgcttcgcctcgctgatgggcgagggcacgcctgtcatcgaaagcgaaggg
cgggcctatccgctcgacatccgctggctcggctcggcgccgcaggagcggatcgaagac
gccatggcggcagccatcgcaaccgcatggcgcgaggaagaaggggacatcctcgccttc
ctgccgggtgtcggagagatcgagcgaacgcgcgagcgggtcgaagcccgactgccaaag
gcgctcgtcctgcctctgcatgggcaggtgcagccagcggatcagcgcgccgcgatcagg
aaagaccccgaggggcgccggcggatcgtgcttgccacggccattgccgaaacctctctc
accctcgacggtgtgtcggtcgtggtcgatgccggcctttcgcgccgtgcggaattcgac
cgggctgcgggaacgacgcacctcgtgacccatcgcgcgagccaggctgctgccgcccag
cgcgctggccgtgcggcacgtcaggggccgggcgttgcctaccgcttgtgggaggagggc
ggccatgccggtcgtccatcatacgatccggccgaaatggagatcgccgacctcgcgccg
ctcgtgctcgatctggcgaagtgggggaccggcgatccggcgagcctgcaatggctcgat
acgcctcctgcagcctcgatcagtgccgcgcgtcagacgctcagggcattgggtgcactg
ggcgaagacggtcgtatcacgcctcgcggtgcgcagctcgccagcctgccgctcgatccg
gcgtcggccgcgatggtactcttcggtgcggagaggggagatgcgcagacggctgcgcgg
ctggcgctgctgttgcaggagagggggcttggcgggcgcggcgaagatctcgaggcgcgc
ttgcagcgctggaactccgacaggggcgcccgcgcggaggccagtcgcaagctggcagga
cgatgggccaaacaggcggaggcgctggtcgagcgcaagggttccgaggacgtaccgccc
gccgttctcctcgcggcggggcgcccagacttcattgccaagcgccgcgatgcttccggc
gagaactggatcgcctcgggaggacgcggcttcattctcgacccggcctctccgctcgca
cgtgcggagtttctcgtgatcggggatgcccagggccaggcgaaaggcgcgcgcatcacg
gcggcgattgcgctggaggagagcgaactgaccgcttggctcggtgaaaggatcgagcgg
cgatcggtgctgcgctggaagaacggacgcgtcgaggcgcggctcgagcggcggttgggc
gcaatcactctcgccagcgggtccgacgccgagccggattcccaagccgttgtggacatg
cttgtggacaaggttctggaaaacccggcaaaactcctgccggccgaactccttgcccgg
gccgccttcatcggtctggacagtttctccgcagcacggctcgccgaaaccgccgacatc
tggcttgcgcccttgctggccggtcggcgcgatctggacattcccaaggggcggttggtc
gatgcgcttctcggaggtctcgactggaacgaccgccagcgcctcgatgcggaagcgccg
cgtgaattcacctcgcccgcaggcacgacgcacccgatcgactatacgggtgacgatgcg
ccgagcgtggaagtgcgtgtgcaggcgctgttcggcctcgaacgccaccccatggttggc
aagacgccgcttctgctgaagcttaccagtcccgccgggcgcccgatccagtcgacccgt
gacctgcccggattctggcgtggaagctgggccgatgttcgcaaggacatgaagggccgc
tacccgaagcaccgctggcctgaggaaccctgggccgaaaagccgagtttgaagaccaag
aacgccttttcaaaatccggcggctga
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