Qipengyuania gelatinilytica: K3136_04280
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Entry
K3136_04280 CDS
T09826
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
qge
Qipengyuania gelatinilytica
Pathway
qge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3136_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qge03019
]
K3136_04280
03009 Ribosome biogenesis [BR:
qge03009
]
K3136_04280
Enzymes [BR:
qge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K3136_04280
Messenger RNA biogenesis [BR:
qge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3136_04280
Ribosome biogenesis [BR:
qge03009
]
Prokaryotic type
rRNA helicases
K3136_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QZD95938
LinkDB
All DBs
Position
850157..851974
Genome browser
AA seq
605 aa
AA seq
DB search
MSFETLPPVIGDALSARGYTALTPVQSAVIEPEARGRDLVVSAQTGSGKTVAFGLALADA
LLAETANLPLVEQPLALVIAPTRELALQVSRELGWLYAGAGLRIATCVGGMDASKERRAL
RAGPAIVVGTPGRLRDHLERGALDLSGLVGVVLDEADEMLDMGFREDLEEILDATPDTRR
TLLFSATMPRPIERLAERYQTNSLRLSLVGEDRGHGDISYQAITVSPSEVENAVVNLLRF
HEAETAILFCATRDNVRRFHATLQERGFGVVALSGEHSQSERNQALQALRDRRARACVAT
DVAARGIDLPTLSLVIHVEIPRDAETLQHRSGRTGRAGKKGTAAIIVPYNRRKRVEGMLR
GAKIEAQWMDAPTPEMIRKQDRSRLMEMLTAETEFAEHDRELAKELMEKRSPEDIAAALV
QAHRSKLPEPEDLIPNTPEARDKAKADRHRPGFEDVVWFKIGVGRRQNAEPRWILPLLCR
RGHITRNEIGAIRVGQFETWFQVPSNIAPKFAEAIARTASADDEQDAILIEEAPEGPRVE
ARQNRRDRHEGGPRVRPKPFGKGPGKKGPHGGPGGKKPGAPFKKGPKPSGKKFAGKRKPG
GKPHS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaaaccctcccgcccgttatcggcgatgccctttccgcgcgcggctatacc
gccctcacccccgtccagtcggccgtgatcgagccagaggcgcgagggcgtgacctcgtc
gtttcggcgcagaccgggtcgggcaagacggtcgctttcggcctcgcgctggcagacgcg
ctgctggccgaaaccgcgaacctcccactggtcgaacagccgctggcgctggtgattgca
cccacgcgcgagctggcgctgcaggtgagccgcgagctcggctggctctatgcaggcgct
ggcctgcgtatcgcgacctgtgtcggcggcatggatgcgagcaaggaacgccgcgcgctg
cgtgccgggcctgccatcgtggtcggcacgcccggacgcctgcgcgaccatctcgagcgc
ggtgcgctggacctgtcgggtctggtcggcgtggttctggatgaagcggacgagatgctc
gacatgggctttcgcgaggaccttgaagagatcctcgatgcgacgcccgatacgcgccgt
acgctgctgttctccgccaccatgccgcgcccgatcgagcggctggcagaacgttaccag
accaattcgctgcgcctcagcctcgtcggcgaggatcgcgggcatggcgatatcagctat
caggcgatcaccgtctcgccctcggaggtcgagaatgcggttgtgaacctgctgcgtttc
cacgaggcggagactgccatcctgttctgcgccacgcgcgacaatgtccgtcgcttccac
gcgaccctgcaggaacgcggcttcggcgtcgtagcgctgtctggcgagcattcgcagagt
gagcgcaaccaggcgctgcaggccctgcgcgaccgccgtgcacgcgcctgcgtcgccacc
gacgttgcggcgcgcggtatcgacctgccgacattgagcctcgtcatccatgtcgagatc
ccgcgcgatgccgaaacgctccagcaccgttcgggccgtacgggtcgtgcaggcaaaaag
ggcacggcggcgatcatcgtgccctacaaccgtcgcaagcgcgtcgagggcatgctgcgc
ggcgcgaagatcgaagcccagtggatggatgcgcccacgccagagatgatccgcaagcag
gatcgctcgcgcctgatggaaatgctcaccgccgaaaccgagttcgcagagcacgaccgc
gaactggcgaaggaactgatggaaaagcgctcgccggaagatatcgccgcagcgctggtg
caggcacaccgttcgaagctgcccgagcccgaagatctcatccccaatacacccgaggcg
cgcgacaaggccaaggccgaccgccatcgcccgggcttcgaggacgtggtgtggttcaag
atcggcgtcggtcgccgccagaatgccgaaccgcgctggatcctcccgctgctctgccgc
cgtggtcacatcacccgcaacgagatcggcgcgatccgcgtcgggcagttcgaaacctgg
ttccaggtaccgtccaatatcgccccgaagttcgccgaagccatcgcccgcactgcgtcg
gccgatgacgaacaggacgcgatcctgatcgaggaagcgcccgagggtccgcgcgtagag
gctcgccagaaccgccgcgatcgccatgaaggcggtccgcgcgtgcgtcccaagcctttc
gggaagggtcccggcaagaagggtccgcatggtggcccgggcggcaagaagcctggcgca
ccgttcaagaaaggccccaagccgtcgggcaagaagttcgccggcaagcgcaagccgggc
ggcaaaccgcacagctag
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