Qipengyuania gelatinilytica: K3136_13950
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Entry
K3136_13950 CDS
T09826
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
qge
Qipengyuania gelatinilytica
Pathway
qge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
qge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3136_13950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qge03400
]
K3136_13950
Enzymes [BR:
qge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K3136_13950
DNA repair and recombination proteins [BR:
qge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K3136_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QZD95147
LinkDB
All DBs
Position
2816304..2817740
Genome browser
AA seq
478 aa
AA seq
DB search
MTALQHVKLGTYYVVHLPEADDFDFWRERARALVQSDVPPDRIAWVEPGGSGDLFAHGER
RMPVPPMDARPVRANRRFVSLAKNAILHSDPERFALLYRLLWRLQSNPRMMEDKADLDVR
RVEELDKNVRRDSHKMHAFVRFRLVESEDEEVGEHYVAWFEPEHHILRANAGFFMRRFSN
MRWSILTPRGSLHWDTETMSEGPPAERHDAPGGDPMEDLWRTYYASIFNPARLKIGAMLK
EMPKKYWKNMPEASLIPDLIAGAQGREAKMVEKGALEFEERPDTLAAIDKAIHACRKCPI
GQLDNHAVMGEGPQDAALMIVGEQPGDQEDQTGRPFVGPAGQLLDTHLEKVGIDRRAAYV
TNAVKHFKYVQRGKRRLHQNPGAKEIDTCRWWIESERAIVKPKLVLAMGASAARGMLGKT
VSISKVRGAPIPLEDGSELWVTAHPSYLLRLDGPAREEQARLFDADLAAVRARLEDQA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgctccagcacgtcaagctcggcacctattacgtggtgcatctgccggaagcc
gacgatttcgatttctggcgcgaacgcgcgcgcgctctcgtccagagcgacgtgccgccc
gaccgtatagcatgggtggagccgggcggtagcggggacctcttcgcgcatggcgagcgg
cgcatgcccgtgccaccgatggacgcaaggccggtgcgcgccaaccgccgcttcgtgagc
cttgcgaagaacgccatcctccattccgatccggaacggttcgcgctgctctaccgcctg
ctctggcgattgcagtcgaatccgcggatgatggaggacaaggccgacctcgacgtgcgg
cgggtggaggaactcgacaagaatgtccggcgcgacagccacaagatgcacgccttcgtc
cgcttccggctggtcgagagcgaggatgaagaagtgggcgagcattacgtcgcctggttc
gagcctgagcatcacatcctacgcgccaatgcgggcttcttcatgcggcgcttttcgaac
atgcgctggtcgatcctgacgccgcgcggctcgctgcactgggataccgagaccatgtcc
gaaggcccgcccgccgagcgtcacgatgcgcccggcggcgatccgatggaggacctctgg
cgcacctattacgcctccatcttcaaccctgcgcggctgaagatcggcgcgatgctgaag
gaaatgccgaagaaatactggaagaacatgcccgaggcttcgctcattccggacctcatc
gcgggcgcgcaggggcgcgaggcgaagatggtcgagaagggcgcgctggagttcgaggag
cggcccgatacgctcgccgccatcgacaaggcgatccacgcctgccgcaagtgtcctatc
ggccagctcgacaaccacgccgtcatgggcgagggtcctcaggatgcggcattgatgatc
gtcggcgaacagcccggcgaccaggaggaccagaccggacgtcccttcgtggggcctgcc
gggcagctcctcgacacgcatctggaaaaggtcggcatcgatcgccgcgccgcctacgtc
accaatgcggtgaagcatttcaaatatgtccagcgcggcaagcgccgtctccaccagaac
ccgggcgcgaaggaaatcgacacctgccgctggtggatcgagagcgagcgcgcgatcgtg
aagcccaagctggtgctcgccatgggcgccagcgcggcgcgcggaatgctcggcaagaca
gtgagcatttccaaggttcgcggcgcgcccattccgctcgaggacggcagcgagctctgg
gtcaccgcgcacccctcctacctcctgcgcctcgatggccctgcgcgcgaggaacaggcg
cggctcttcgatgccgaccttgccgccgttcgcgcgcggctggaggatcaggcgtga
DBGET
integrated database retrieval system
