Qipengyuania rhodophyticola: ACFCXQ_03215
Help
Entry
ACFCXQ_03215 CDS
T11546
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
qip Qipengyuania rhodophyticola
Pathway
qip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFCXQ_03215 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qip03021
]
ACFCXQ_03215 (rho)
03019 Messenger RNA biogenesis [BR:
qip03019
]
ACFCXQ_03215 (rho)
Transcription machinery [BR:
qip03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACFCXQ_03215 (rho)
Messenger RNA biogenesis [BR:
qip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACFCXQ_03215 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Spore_III_AA
AAA_22
ATPase_2
AAA_25
AAA
S1CSD-TOTE-2
GpA_ATPase
AAA_14
Motif
Other DBs
NCBI-ProteinID:
XHO02259
LinkDB
All DBs
Position
complement(690948..692213)
Genome browser
AA seq
421 aa
AA seq
DB search
MHLRDLKEKASAELVGMAEELGVEGASTMRRQDLLFSILRELAEDEDYSEDIMGVGTIEV
LQDGFGFLRSPEANYLAGPGDIYVSPNQIRKWGLRTGDTVEGQIRAPGEGERYFALTDLT
TVNFETPDAVRMRTNFDNLTPLYPDQKLTLDQADPTVTDKSARVIDIISPQGKGQRALIV
APPRTGKTVLLQNIAKAITDNHPEVFLLVLLVDERPEEVTDMQRSVKGEVISSTFDEPAQ
RHVQVAEMVIEKAKRLVEHKNDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPS
LDVGKSGTRKEELLVEKDTLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFDTMN
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcagagatctaaaagaaaaagcatcggccgaacttgtcggtatggccgaggag
cttggcgttgaaggcgcctcaaccatgcgccgccaggatttgctcttcagcatcctgcgc
gagctggcagaggatgaagattatagcgaagatatcatgggtgtcggcacgatcgaagtg
ctgcaagatggcttcggcttcttgcgttcgccggaagccaattatctcgcgggcccgggc
gacatttatgtttcacccaaccaaatccgtaagtggggtttgcgcacaggcgacactgtt
gaagggcaaatccgcgcaccgggcgaaggcgagcgctatttcgcgctgaccgatttgacg
acagtcaatttcgaaacgcctgatgccgtgcgcatgcgcaccaatttcgacaatctcacc
ccgctttaccctgatcagaagctgacgcttgatcaggctgatccgactgtcactgataaa
tctgcccgcgtgatcgacatcatctcaccccaaggcaaaggccagcgcgcactcatcgtt
gcgccgccgcgtaccggtaaaacggtgctgctgcaaaatatcgcgaaggcgatcacggac
aatcaccctgaggtcttcctgctggttctgctggttgatgagcgtccggaagaagtcacc
gatatgcagcgcagcgtgaagggcgaggtgatctcctcaacctttgatgagccggctcag
cgccacgtgcaagtggctgaaatggtgatcgagaaggctaaacgcctggttgaacacaag
aatgatgttgtgattctgctcgattccatcacccgtcttggccgcgcttacaacacagtt
gtgccaagctcgggcaaagtcctcacaggcggtgtggacgctaacgctttgcagcgcccc
aagcgcttcttcggtgcggcgcgcaacatcgaggaaggcggctcgctatcgattatcgcc
actgcgctgatcgacacgggcagccgcatggacgaggtgatctttgaagagttcaaaggc
actggtaactcggaaatcgtgctcgatcgcaaggttgctgataagcgcatcttcccatcg
ctcgatgtcggtaagtctggcacgcgtaaggaagagctgctggtcgagaaggatacgctt
tcgaagatgtgggtgctgcgccggatccttatgcagatgggcacggtcgacgcgatggaa
ttcctgctcgacaagatgaaggattccaagaccaatgaggatttcttcgacacgatgaac
cagtag
DBGET
integrated database retrieval system
