Quercus lobata (valley oak): 115949909
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Entry
115949909 CDS
T07350
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115949909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115949909
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
115949909
Prokaryotic type
Archaeal type
TFB
115949909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
zf_Tbcl_2
Ribosomal_S27e
Zn_ribbon_3
zinc_ribbon_6
Motif
Other DBs
NCBI-GeneID:
115949909
NCBI-ProteinID:
XP_030923033
LinkDB
All DBs
Position
6:complement(17065202..17071069)
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AA seq
173 aa
AA seq
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MSYAYCSDCKRQTKVVFDHLVGDTVCSKCGLVLESHSIDETSEWRTFTNESGDNDPVRVV
GLTNPLLADGGLFVVIAKPNGSTGEFLSSSLGRWQNRSSNPDCGYDHVKSECPTFLRSKG
KAILCSNEDGNFIAFTATVVVDESVMVEENPSDGNSLCVLICKELLISYARLL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgcgtattgctcagactgtaagcggcaaacgaaggtggtgttcgaccacttg
gtcggcgacaccgtgtgttcgaagtgcgggttggtgttggagtcgcactcaattgacgag
acctctgagtggaggactttcacaaacgaatcgggcgataacgacccggttcgtgtcgtc
gggctgaccaacccgctcttggccgacggagggctcttcgtcgtcatagccaagcccaac
ggctccaccggagagttcctctcctcctcccttggccgatggcagaatcgcagttccaac
cccgattgtgggtatgatcatgtgaaatctgaatgtcctacattcttgaggtcaaagggt
aaagctatactttgtagtaatgaggatggaaacttcattgctttcacagctactgttgta
gttgatgaaagtgttatggttgaagagaacccttctgatgggaactctctatgtgtgcta
atttgcaaggagcttttaataagttatgcaaggttgctgtaa
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integrated database retrieval system
