Quercus lobata (valley oak): 115950192
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Entry
115950192 CDS
T07350
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115950192
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
115950192
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
115950192
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
115950192
NCBI-ProteinID:
XP_030923290
UniProt:
A0A7N2LYX7
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Position
6:32906701..32913709
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AA seq
617 aa
AA seq
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MKIVTYNVNGLRSRISQFGSLHKLLSSFDADIVCLQETKLRRQELTADLAMADGYESYFS
CTRTVDKGRTGYAGVATFCRVKSAFSSHEVALPIAAEEGFTGLLENSLNGKGEAHEGLED
FAKDDLLKVDNEGRCVVTDHGHFVLFNLYGPRAECDDAQRIQFKLTFYKILQKRWESLLL
QGRRIIVVGDLNIAPTALDRCDAGPDFEKNEFRRWFRSILVECGGPFNDVFRTKHPDRKE
AFTCWPQNTGAEEFNYGSRIDHILCAGSCLHQEHDLQGHSFMNCHVMECDILTQYRRWKP
GNTLRWKGGRSIKLEGSDHAPVLTRLLGIPDIAHHSTPTLSARYIPMIRGLQQTLVSVLM
KRQVAEQSKSFEMSGSISDENIRIEMGNERAKRSFENCSTSGVSHVESCPSNLESEGIAS
DTDIQSKGFANDAVCKTLLMSGSEHSQSAPSNGTKKKARKSQWSQLSLRSFFQKSSNLRD
SADNSNNDISISQKDIPQSDYHSSDTPVVDVQSSSSQQDELNSSASTQDQCELNSCSLEK
EKTNVALLEWRRIQQVMQNSIPLCKGHSEPCVARVVKKQGPNFGRRFYVCARAEGPASNS
EANCGYFKWADSKSRLK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacgtacaacgttaatggtctgagatcacgcatttcacagttcggttct
ctccacaaattgctctcttccttcgatgccgacatcgtttgccttcaggagacaaagttg
agaagacaggaactaacggcggatttagcaatggcagatggatacgaatcctatttttcg
tgcactcgtacggtcgataaaggtcgaacgggctatgccggtgttgctacgttttgtcgt
gtaaagtctgcgttttcaagtcacgaagtggcccttccgattgcggcggaggaaggcttc
actgggcttcttgaaaattctctaaatggaaaaggtgaagcacatgaaggtctagaggac
tttgctaaagatgatcttcttaaggttgacaatgaggggcgttgtgttgttacagatcat
ggtcattttgttctttttaatctgtatggccctcgagctgaatgtgatgatgcacaaagg
atccagtttaagctcacgttttacaagatattgcagaaaagatgggagtctctcctactt
caggggaggaggataattgttgttggtgatctcaacattgcacccactgcactggatcgt
tgcgatgctggaccagatttcgagaagaatgaattcagaaggtggtttagatctatacta
gtggaatgcggaggccctttcaatgatgttttcagaacaaaacatcctgacagaaaagaa
gcattcacatgctggccacaaaacacaggcgctgaagaatttaattatgggagcagaatt
gaccatattttgtgtgctggatcatgcttgcatcaagaacatgacctgcaaggccatagc
tttatgaattgccatgttatggagtgtgacatactgacacagtatagacggtggaaacct
ggaaatacgcttaggtggaaaggtgggagaagcatcaaacttgaaggttctgatcatgct
cccgttttaacaagattactgggaattcctgacattgcccatcatagcactccgactttg
tctgctagatatattcccatgattcgtggtctccagcaaactcttgtgtcagtcttaatg
aaaagacaagttgctgaacaaagtaaatccttcgagatgtcaggttcaatttcagatgaa
aatatcagaattgagatgggcaatgagagagcgaaaagatcatttgaaaactgcagcact
tctggtgtatcccatgttgaatcttgtccttcaaatctagaatctgaaggtattgcttct
gatacagatattcagtccaaagggtttgctaatgacgccgtttgtaaaaccttgcttatg
tcaggaagtgagcatagtcaatcagcgcccagcaatggaaccaaaaaaaaggctagaaaa
agtcaatggtcccaactctcactgaggtcattttttcagaaaagttcaaaccttagagat
agtgctgacaactctaataatgatatttcaatcagtcagaaagatatcccccagtctgat
tatcactccagtgatactcctgttgttgatgttcaaagcagcagttcccagcaggatgag
ttgaactcaagtgcatcaactcaggatcaatgtgaactaaattcctgctctctggagaaa
gagaaaactaatgttgctttattggagtggcgaaggatacagcaagtgatgcagaatagt
atacctctttgcaagggccatagtgaaccatgtgttgctcgggtagtgaagaaacaaggt
cctaactttggtcggagattttatgtctgtgctcgtgctgagggacctgcatccaattca
gaagcaaattgtggttactttaaatgggcagattcaaaatctcgcctcaaatga
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