Quercus lobata (valley oak): 115950724
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Entry
115950724 CDS
T07350
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115950724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115950724
Spliceosome [BR:
qlo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115950724
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
115950724
NCBI-ProteinID:
XP_030923820
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Position
6:complement(7601576..7602956)
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AA seq
406 aa
AA seq
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MAILEDYDAYLEDLNELDDDEQQQQQQNSNNNCVYNVDESLTQSNFYVKGFKNITSKVEN
LFSLGLELTVDNDPDAQYRFTVASNNLLLEIDSQIFNLYNLIRDKYCKKFPELESIIQDP
IEYARVVKKIGNETDITVIDGLNLAPAILMVVSITASTTSGKLPLSEQDLADTIHACDYV
LALDSSKKRVLDLLEARMGYIAPNLSVIVGVTVAAKLIVAVGGLSSLAYTPSYNVKLVGS
VKKENIGFSNVKTCLWGYLEETEIYRSSRPSLKRCIGAVLPNKAVLAARMDLTKGDPTGK
WGRDTLDTIRETIEKLQEPPAARLAKPLPVPVLDHYSSKKKKRGGQRQRNSKKRYGITET
RKLANRVQFGVPEESYLGAGYGKGYGILGQVGLKVQRKLPARNWVC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcttgaggactacgatgcttatttggaagatctcaatgaacttgatgatgat
gaacaacaacaacaacaacaaaactcaaacaacaattgcgtctataacgtcgatgaatct
ctaactcaatccaatttctacgtaaaagggttcaaaaatattacatccaaagtcgaaaac
ctcttctctcttggattagaattgacagtggataatgacccagatgctcaataccgattt
acagtggcctctaacaacttgttgctcgagattgatagccaaatctttaacctctacaat
cttattcgcgacaagtattgcaagaaattcccagaactcgaatctataattcaagaccct
atcgaatacgctcgagttgttaaaaagattggtaacgaaacagatatcactgtaatcgat
ggcttaaacttagccccagctattctaatggtagtttctataacagcatcaacaactagt
ggcaaattaccactttcggaacaagatttagcagacacaatacatgcatgtgattacgtt
cttgcccttgattcgtcgaaaaaaagagtgttggacttgttggaggctagaatgggatat
attgcaccgaatctttcagtcattgttggtgtcactgttgcggcgaagcttatagttgct
gttggtggtctttcatcactggcatatacaccttcttataatgttaagcttgttggttct
gttaaaaaagaaaacataggattctcaaatgtgaaaacatgtctgtggggttatcttgag
gaaactgagatttataggagctcgcggccttcgttgaagaggtgcattggtgcagtttta
cctaataaagctgtattagcagctcgtatggatttaactaaaggagatccaacggggaag
tggggaagggacacgttggatacgatacgtgagacgattgagaagttgcaagagcctcct
gctgcaagactagccaaaccactcccagttcctgttcttgatcattatagttctaagaag
aagaaaaggggtggccaacgacaaagaaattcgaagaaacgttatgggataaccgagacg
agaaagttggctaatagggtgcagtttggagtacctgaggagagttatttaggtgctgga
tatggcaagggatatgggattcttggccaggttggtttgaaggttcagagaaagcttcca
gcaaggaattgggtttgttaa
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