KEGG   Quercus lobata (valley oak): 115950906
Entry
115950906         CDS       T07350                                 
Name
(RefSeq) notchless protein homolog
  KO
K14855  ribosome assembly protein 4
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:qlo03009]
    115950906
Ribosome biogenesis [BR:qlo03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    115950906
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_SCAP Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ASA1 Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_DCAF12 CFAP251_N NLE Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_VPS8 WD40_RFWD3 Tricorn_2nd Beta-prop_SPT8 eIF2A Beta-prop_HPS5 PD40 PAC11 RMC1_N TRM82_WD Tricorn_N WDR54 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_Vps41 Beta-prop_ELP1_1st TibC_1st
Other DBs
NCBI-GeneID: 115950906
NCBI-ProteinID: XP_030924040
LinkDB
Position
6:complement(5528863..5541483)
AA seq 478 aa
MEVVEGEEQRETSNKVMCLLTDPEGTPLGVPMYLPQIAGPQQLQQMVNQLLNNEEKLPYS
FYISDKELVVPLGTYLEKNKVSVEKALSIVYQPQAVFRIRPVNRCSATISGHTEAVLSVA
FSPDGRRLASGSGDTTVRIWDLNTQTPLFTCTGHKNWVLCIAWSPDGRHLVSGSKAGELL
CWDPETGRPSGNPLTGHKKWITGISWEPAHLNAPCRRFVSASKDGDARIWDIVTKKCVIC
LSGHTLAITCVKWGGDGVIYTGSQDCTIKVWETSQGKLIRELKGHGHWVNSLALSTEYVL
RTGAFDHTGKQYSSPEEMKKVALERYNKMKGNAPERLVSGSDDFTMFLWEPFVSKHPKTR
MTGHQQLVNHVYFSPDGQWVASASFDKSVKLWNGATGKFVAAFRGHVGPVYQISWSADSR
LLLSGSKDSTLKVWDIRTQKLKQDLPGHEDEVYAVDWSPDGEKVASGGKDRVLKLWMG
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggaggtggtggaaggagaagagcaaagagagacaagcaataaggtgatgtgtcttttg
acggacccagaaggaactcctctaggagttcccatgtaccttccccaaatcgctgggcct
caacagcttcagcaaatggtcaatcagcttctcaacaatgaggagaagttgccctattct
ttctatatatcagataaggagcttgttgtgcctcttggcacttacttagagaaaaacaaa
gtttctgtggagaaggcactctcaatagtttatcaaccacaagctgttttccgaattcgt
ccggttaatcgttgttcagcaacaatttctggtcacactgaagctgtactttcagttgcc
tttagtcctgatgggcgacgtttggcaagtggttctggtgataccacagtcagaatttgg
gatcttaatacccagacaccgctattcacatgtacaggacacaagaactgggttctttgt
attgcatggtctccggatggtaggcatcttgttagtggcagcaaggctggagaacttcta
tgctgggaccctgagacagggaggccatcgggcaatccacttaccggtcacaagaaatgg
attactggtatctcttgggaaccagcccacctgaatgctccatgtcgtcgatttgtaagt
gctagtaaagatggtgatgcacgcatatgggacatcgttactaagaaatgtgttatttgt
cttagtggccacacacttgcaataacttgtgtaaaatggggtggagatggagttatctat
acaggctcccaggactgtactatcaaagtttgggaaacttcacaagggaagctgattcgt
gaattaaagggtcatgggcattgggtcaactcgcttgcattgagcactgaatatgttctt
cgcactggagcttttgatcatacaggcaagcaatattcatctcctgaggaaatgaagaag
gttgctttggaaaggtataacaaaatgaaaggcaatgcccctgaaagattggtctctgga
tctgatgattttactatgttcctttgggaaccttttgtcagcaaacacccaaaaactcga
atgacaggtcatcaacagctagtaaatcatgtttatttttcacctgatgggcaatgggtg
gcaagtgcctcatttgataagtctgtcaagttatggaatggtgctactgggaaatttgtt
gctgcttttcggggccatgttgggcctgtttatcagatcagctggtccgcagacagtagg
cttcttttgagtggcagcaaggactccacactgaaggtttgggatatccggacacagaag
ttgaaacaagaccttccaggccatgaggatgaggtctatgctgttgattggagtccagat
ggtgagaaggtggcgtcaggtggcaaagatagagtattgaagttgtggatgggttag

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