Quercus lobata (valley oak): 115951257
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Entry
115951257 CDS
T07350
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115951257
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115951257
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
115951257
NCBI-ProteinID:
XP_030924300
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All DBs
Position
7:complement(20851685..20855820)
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AA seq
426 aa
AA seq
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MAQQIRYLLPFFVFMLSFISCYSTLQKDPRFKDVIKQSTHVLRLKRFDRILGTISTSGKT
INVNDYGAKGDGTDDTEAFKKAWEVACSTQGAILVVPQKTYLLKPIRFLGPCKSDLKVQI
SGTLEASNDRSDYSQDGRHWLLFDSVQNLIVDGGGTINGNGKIWWQNSCKVNKALPCTHA
PTALTFYKCKYLTVNNLKIQEAQQIHTSFEKCMNVQASLLTITAPKDSPNTDGIHVADTQ
DIQISSCNIGTGDDCISIASGSQNVQARDITCGPGHGISIGSLGSGNSESYVSGVTINGA
KLYGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVANPIIIDQNYCDQDKPCSEQKSAVQV
KNVLYQNIHGISASDVAIEFNCSNSFPCQEILLQSINLEAEKGKKTKALCNNVQSTDTGI
VSPHCP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcaaataagatatcttcttccatttttcgttttcatgctctctttcatttca
tgttatagcactttgcaaaaggacccacggtttaaggacgtgatcaagcaaagcactcat
gtcttacgtttgaaaaggtttgatagaatattgggtaccatttctacctcgggtaaaaca
attaatgtcaatgactatggagctaaaggtgatggtactgatgacacagaggcatttaag
aaggcttgggaggtagcttgttcaacccaaggagctattctcgtggtgcctcagaaaacc
tatcttcttaagccaattagattcttaggtccttgtaaatctgatcttaaagtgcagatt
tctggaaccttggaagcatctaatgatcgatcggactacagccaagatggtagacactgg
ctactcttcgatagtgttcaaaatttaatagttgacggtggtggaaccatcaatggtaac
gggaagatatggtggcaaaactcttgcaaagtcaataaagctctgccttgcacgcatgca
ccaacggctctgaccttctataagtgtaagtatttgaccgtgaataatttgaagatccaa
gaagcgcaacaaattcacacctctttcgaaaaatgtatgaatgttcaagcttctttgttg
actataactgctccaaaggatagccccaacactgatggaattcatgtcgctgacactcaa
gacatccaaatttcaagctgtaatataggaacaggtgatgattgtatttcaattgcaagt
ggatcccagaacgtgcaagccagagacataacctgtggaccgggtcatggaattagtatt
ggaagcttaggatctggaaattcggaatcttatgtttctggagtaaccataaacggagct
aagttgtatggaaccacaaatggtgtgaggattaagacatggcagggagggtcaggaagt
gcaagcaacatcaaatttcagaatgttgaaatgcataatgttgccaaccctataataata
gaccaaaattactgtgaccaagacaaaccatgcagcgaacagaaatctgcagttcaggtg
aaaaatgtgctttaccaaaacattcatgggattagcgcttctgatgttgccattgaattc
aactgcagcaatagctttccatgtcaggagattttgttgcaaagcattaacttggaagct
gaaaaagggaaaaaaaccaaagctttatgcaataatgtgcaatcgactgacaccggaatt
gtttcccctcactgcccttga
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