Quercus lobata (valley oak): 115951308 Help Entry 115951308         CDS       T07350                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL4   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism qlo  Quercus lobata (valley oak) Pathway qlo04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:qlo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     115951308  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:qlo04121]     115951308 Enzymes [BR:qlo01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      115951308 Ubiquitin system [BR:qlo04121]  Ubiquitin ligases (E3)   HECT type E3    115951308 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT Arm ARM_ARMC5 HEAT_2 V-ATPase_H_C Motif Other DBs NCBI-GeneID:  115951308 NCBI-ProteinID:  XP_030924360 LinkDB All DBs Position 7:complement(45311053..45320278) Genome browser AA seq 1555 aa AA seqDB search MGNRGQKRTEMVDELPADKRACSSLDFRPSSSNSSVQTHMNSTHSIHETHDNDMDTSSSA SASSRSEGEPERDSAYGSCDSDDAGQRRNNLRDYRDYQRQRSSGDHGKFKRILTSLSEES EPSGQLAALTELCEVLSFCTEDSLSSMISDSLAPLLVKYAKHESNPDIMLLAIRAITYIC DVYPRSSNFLIRHDAVPALCRLMAFEYVDVAEQCLQALEKISREQPLACLQAGAIMAVLN FIEFFPTSVQRVALSTVVNICKKLPSESPSRFMEAVPILCNLLQHEDRQLVEYVAICLIK IVEQVSQSSEMLDELCKNALIGQIVHLLDLNSRTTVSRPIYNGLIGILVKLSSGSIVAFK ALYELNISSILKDILSTYDLSHGMSSPHTVDGQCNQVYEVLKLLNELLPTSARDLDAQQV SDKEAFLVNCPSLLQKFGMDVLPLLIQVVNSGANLYVCYGCLSVVNKLVYLSKSDMLLEL LKNANISSFLAGVFTRKDQHVLLVALQIAEMILQKLSDIFLNSFIKEGIFFAIDALLTQE NCSQLMFPVFSGIQLPFESSQKLASKEVLRCLCYAFATGQSATASETGSCKLEKDSVHNL AKHIKTNYFAPKLYDSEKGVTDILQKLRTLSTTLSDLVNMTISNDVPAQPEERFYCILHQ IMANLNGRETISTFEFIESGIMRSLLNYLSNSQYLREKCEGQGVNGHFFVVEKRFEMFAR LFLSSSEPHSVDLPLVVLIQKLQSALSSLENFPVILSHGSKQRNSYAMIPSGRRTLHPCL KVRFVRGDVETCLCDYSEDVQTVDPFCSLDAIEGYLWPKVSIKRNEHIESSSCAMGQTDS LPPDLPSNASAGPGESLPHMEHDSMSTDLPNMQEDDAKLSQSAPEEAVTEPVEQELHIPS DPDTNKEIQHPASSSDEDASPKLVFYLEEQQLDRTLTLYQTILHQQIKENEFITCSKLWS QVYTLTYKRAVEPIQNNSQECILSEKNFFVPDNVRAYMQYTPFFSSMFACELTSDLERSS STYDILFLLKSLEGLARNAFHLMSRERVCAFAEGKIDNLDGLKVVVPSVPQNEFVSNKLT EKLEQQMRDSLSLSTGGMPSWCKQLMASCPFLFSFEARCKYFRLAAFGQLQIQSHQLSHS NSGPTSDRRPSSSSLPRKKFLVFRNQILDSAAQMMDLHARHKVLIEVEYNEEVGTGLGPT LEFYTLVSHEFQKSGLVMWRGDHSSFAPRTSLQAEDMAILMSPSGLFPCPWPSSLNTSDD RFSEVLKKFVLLGQVVAKSLQDGRVLDLHFSKAFYKLIIGQELTLYDIQSFDPELGRTLL EFQALVNRKKFLESVCKENSPPEFDSCFRNTRIEDLFLDFTLPGYPDYVLTSGADHKMVN MSNLEEYISLVVDATINSGISRQVEAFKSGFNQVFPIEHLQIFTEKELERLLCGEYDSWA FNELLDHIKFDHGYTSSSPPVVNLLEIIQEFDHGQRRAFLQFVTGAPRLPPGGLASLNPK LTIVRKHCGNWADIDLPSVMTCANYLKLPAYSSKEKMREKLLYAITEGQGSFHLS NT seq 4668 nt NT seq  +upstreamnt  +downstreamnt atgggtaatcgtggacaaaagcgtactgaaatggttgatgaattgccagctgataagagg gcgtgtagttcattggattttagacccagttcatccaactcctcagttcagacccatatg aactccacacattcaatacatgaaacccatgacaatgatatggacacttcctcttctgct tcggcttcaagccgatcagagggggaacccgagagggattcagcatatgggtcttgtgat tctgatgacgcggggcagaggcgtaacaatcttcgcgactatcgcgattatcagaggcag agatcttccggtgatcatgggaaattcaagaggattttaacaagtttgagtgaagaatcc gagccttcagggcaactggctgcgcttactgagttgtgtgaagtgttgtcgttttgtaca gaggattcactttcaagcatgatttccgactcattagctccacttcttgtaaaatatgca aagcacgagagtaatccggatataatgttgctggctataagggctataacttatatttgt gatgtgtatcctcggtcatctaatttcttaattaggcatgatgcagttcctgctctttgt cgattaatggcttttgagtacgtggatgttgctgaacagtgtctgcaagctttggagaag atatcgcgggagcaaccacttgcttgcttacaggctggggcaattatggctgtcctaaat tttatcgaattcttcccaacaagtgtacagagagttgctttatccactgtggtgaacata tgtaagaaacttccttcagaatctccttcacgttttatggaagctgttcccatactgtgc aatcttcttcagcatgaggatagacagcttgtcgaatatgttgctatttgcttgattaaa atagtggagcaagtaagtcagtcttccgagatgctggatgaactttgtaagaatgcgctg attggtcaaattgtacatcttctagacttgaatagccgaacaactgtatcccgacctatt tataatggtttgattgggatacttgtcaaactttcttctggttcaattgtagccttcaaa gctctatatgagctcaatataagcagcatattgaaggatatattatccacttatgacctc tcacatggaatgtcttctcctcatacagtggatggacaatgcaaccaggtatatgaagtt ctgaagttgcttaatgagcttctacctacttcagccagagatctagatgctcaacaagtg tcagataaggaagctttcttagttaactgccccagtcttctgcaaaaatttgggatggat gtacttcccttgttgatccaggtggttaattctggtgcaaatttatatgtttgctatggc tgcctatctgttgtcaacaagttagtttatttgagcaaatctgacatgcttcttgaattg ctgaagaatgccaacatttcaagctttttggctggagtattcactagaaaggatcagcat gtgctattggtagccctacagattgctgagatgatcctgcagaagctttctgatattttc ctgaattccttcatcaaggaaggtatcttctttgctattgatgcactgctaacacaagaa aactgttctcagttgatgtttccagtgttcagtggcatccagctaccgtttgaatcaagt cagaaattagcttcaaaggaggtcctgagatgcttatgttatgcttttgctactggtcaa tctgctacagcatcagaaactggtagttgcaagcttgaaaaggattctgttcacaatctc gcaaagcacataaagactaattactttgcaccaaaattatatgactctgagaaaggcgtg actgatattcttcaaaagctcagaactttgtctactactttaagtgatttggttaacatg acaatcagtaatgatgttcctgctcagcctgaagagaggttttattgtatattgcatcaa attatggctaatcttaatggaagggaaaccatttccacttttgaatttattgaaagtggg attatgagatcactactgaattacctatccaatagccagtacctaagggaaaagtgtgag ggtcagggtgtaaatggtcatttctttgttgtagaaaagcggtttgagatgtttgcaagg ctgttcttgtcttcttcagaaccccattctgtggacttgcccctagtggtgctgatacaa aaattacagagtgcactatcttctttggagaatttcccggttattttgagccatggatcc aagcaaaggaactcttatgccatgattccaagtggacgccgcacactacatccatgtcta aaagttcgttttgtgcgaggagatgtagagacatgcctttgtgactattctgaagatgtt caaactgttgatcctttttgctctttggatgccattgaaggatatctgtggcctaaagtt agcattaaaagaaatgagcacattgagtcatccagttgtgctatgggccagacagatagt ctaccacctgatttaccatcaaatgcaagtgctggcccaggagaaagtttacctcacatg gaacatgacagtatgtccacagatttgcctaatatgcaggaagatgatgctaaattgtct cagtctgcacctgaagaagcagtcactgagcctgtggagcaagaattacacattccttca gacccagacaccaataaggaaattcagcatcctgcctcttctagcgatgaagatgcttca ccaaaactggtgttttaccttgaagagcaacagctggatagaacactgacactataccaa acaattctccaccaacaaataaaagaaaatgaatttataacttgttcaaaattgtggagt caagtgtacactttaacatataaaagagctgtggaacctatccaaaataattctcaagaa tgtattctgtcagaaaaaaatttctttgttccagataatgtcagggcatatatgcaatac actccatttttctctagcatgtttgcttgtgaactcacttctgacttggagaggtcaagt tctacttacgatatactatttctgctcaaaagcttggaaggcttggcccgaaatgcattt catctgatgtcccgtgaaagagtatgtgcttttgctgaaggaaaaattgataacttggat ggtctaaaggtagtagttccttcagtgccacagaatgagtttgtaagcaataaattgaca gaaaaactagaacagcagatgcgggactctttgtctttgtccactggtggtatgccttct tggtgtaaacagttaatggcttcttgtccttttctatttagttttgaggcaagatgtaag tacttccggttggcagcatttggtcaactgcaaattcaatctcatcaactgtctcatagt aattcagggcccactagcgacaggcggcccagctctagcagtttgccacgtaagaagttt ttagttttccgcaaccagattctggactctgcagcccaaatgatggacctgcatgcgcgt cataaagtgcttattgaagtggaatataatgaagaagttggtactggtcttggtccgaca ttggaattctataccctggtcagtcatgagttccagaagtctggcctagttatgtggagg ggggatcatagttcatttgcccccaggacaagcttacaggctgaggatatggcaattctg atgtcaccttctggacttttcccatgtccatggccatctagtttaaatacatctgatgat cggttttctgaagttctgaaaaagtttgtccttttgggccaagtggttgcaaagtctctt caagatggaagggtcttggatcttcatttctctaaagccttttataaactcattattggc caggaacttactctctatgacatccagtcatttgatcctgagcttggtaggacattgcta gagtttcaggctcttgttaataggaaaaagtttttggaatctgtctgcaaagaaaattca ccacctgaatttgattcatgctttcggaataccagaattgaagatcttttccttgatttt actctccctgggtatcctgactatgtacttacttctggcgctgatcataaaatggttaat atgagtaacttggaggaatatatctcgcttgttgtggatgcaactataaacagtggaatt tctagacaagtagaagcttttaaatccggatttaaccaggttttccctattgaacatctt cagatttttactgaaaaggaactagagcgtttactatgtggagaatatgattcttgggct ttcaacgagctcctggatcatatcaagtttgatcatggatacacatccagcagtcctcca gtagttaatttgctggaaatcatacaagagtttgaccatggacagcgacgagcatttctg cagtttgtgactggggcacctaggcttcccccgggaggtttggcgtctctcaatccaaag ttgacaattgttcgaaaacattgtggcaactgggctgacattgacctacctagtgtgatg acttgtgcaaattatcttaagctgccagcttactcttcaaaagagaagatgagggagaag ctcttatatgccataacagaaggacaaggatcattccacttatcatag

DBGET integrated database retrieval system