Quercus lobata (valley oak): 115952239
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Entry
115952239 CDS
T07350
Name
(RefSeq) protein XAP5 CIRCADIAN TIMEKEEPER-like
KO
K13119
protein FAM50
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115952239
Spliceosome [BR:
qlo03041
]
Complex C
Other components
Complex C specific factors
115952239
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Gene cluster
GFIT
Motif
Pfam:
XAP5
Msl2-3_C
DUF6739
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
115952239
NCBI-ProteinID:
XP_030925192
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Position
1:complement(29728738..29736332)
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AA seq
298 aa
AA seq
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MICRERITHSSIGDRCTNDNSKRHTSVAYLPFRWHQRDPAKRINIRTKIEEEEKEKLQKQ
QQEEEELQLKKRKQRKIKGNSRLSFTDDIENGSEEEEDENETSQSKKFRHGKYGKDPTVE
TSFLPDSEREAEEQAERERLQRRWFLEQEQIRNEPLQITYSYWDGAGHRRVLQVRKGDTI
GEFLRAVQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFD
VHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTRKWERYTIHGD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcagggaacggatcactcattcttccattggggacaggtgcacgaacgacaac
tccaaacgtcacacatccgtcgcctacctaccgtttaggtggcaccagcgagatccagct
aagagaattaatattcggaccaaaattgaagaggaagagaaggagaagcttcagaagcag
cagcaagaggaggaggagcttcaattaaaaaagcgtaaacagaggaagataaaggggaat
tctcggttatcgtttactgatgatattgagaatggtagtgaagaggaggaggatgagaat
gaaacttcacaatcaaagaaatttcgacatggcaaatatggtaaagatccaacagtggag
actagctttctgcctgacagtgagagggaggcagaggagcaagctgaacgtgaaaggctg
cagagacggtggtttcttgagcaggagcagattcgaaatgagcctcttcaaattacttac
agttactgggatggagctgggcataggcgggtgcttcaggtacggaagggggataccata
ggagagttccttcgggctgtacagcagcaacttgcacctgagtttcgagaaattaggaca
acctcagtggagaatttgctttatgtgaaagaagatcttatcattccccatcagcatagt
ttctatgagctaatcgtgaacaaggctaggggcaaaagtggaccgcttttccactttgat
gtgcatgaggacgtgcgaacaattgctgatgcaacaatagaaaaggatgagtctcatgct
gggaaagttgtcgagaggcactggtacgaaaagaacaagcatattttccctgcttcaaga
tgggagatatatgacccaacgagaaaatgggagcgttataccatccatggggattga
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