Quercus lobata (valley oak): 115952363
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Entry
115952363 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115952363
04121 Ubiquitin system [BR:
qlo04121
]
115952363
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115952363
Membrane trafficking [BR:
qlo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115952363
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115952363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-C3H2C3
DUF1272
VPS18_RING_C
Rad50_zn_hook
Zn_ribbon_8
zf-Nse
Prok-RING_4
zf-RING_16
zf_RING_Vps8
DUF7129
Motif
Other DBs
NCBI-GeneID:
115952363
NCBI-ProteinID:
XP_030925380
UniProt:
A0A7N2M4K2
LinkDB
All DBs
Position
7:complement(30854065..30855667)
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AA seq
379 aa
AA seq
DB search
MASTASSYWCYRCNHFIRVRVRVEDAVLCPDCGGGFVEETPTRSPPHRFPAAMYIDNPPN
PEHNAIPIPIPRLRRSRRNGGDRSPFNPVIVLRGNEPERGNFELYYDDGAGSGLRPLPAS
MSDFLMGSGFDRLLEQLAQLEINGVGRLEHPPASKAAIESMPFVKIVGSHVSMESHCAIC
KEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPTDVRGGSGRSSPELDPVT
GPARDEETMGLTIWRLPGGGFAVGRFTGGIRAAERELPVVYTEVDGGFNDGGFNGGGGGG
GNNVPRRISWETSMRSSRESGGLRRAFRSFFSFFGRLRITSSTSRSRSEPQRSHSNLVFS
RSWRRRQRGQPAALDDDRW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactgcctcgtcctactggtgctacaggtgcaaccacttcatccgggtccgg
gttcgggtcgaagacgccgtcctctgccccgattgtggcggcggattcgtcgaagaaacc
ccgacccgatccccgccccaccggttccccgccgcaatgtacatcgacaacccgcccaat
ccggagcacaacgcaatcccaatcccaatccctaggctccgccgcagccggaggaacggt
ggggatcgctcgccgttcaacccggtcatcgtcctccgtgggaacgagcccgagagaggg
aatttcgagctctactacgacgatggagccgggtcggggcttcggcctttgccggctagt
atgtcggattttttgatgggatcagggtttgatcggcttctcgagcaattggcgcagttg
gaaatcaatggggttggaaggttagagcatccacccgcttcaaaagccgctatcgaatcg
atgccgtttgtgaagatcgttgggagccatgtctccatggagtctcattgcgcaatttgc
aaagaaccgtttgagctggattcggaggcgagagagatgccttgtaagcacatttaccat
tcggattgtattctgccatggctttcgattaggaattcgtgcccggtgtgtcggcacgag
ttgcccacggatgtgcgtggtgggagtggtaggagttcgccggagttggaccctgtaacg
ggtccggctcgggatgaagagaccatgggattgacgatttggagattgcccggtggcggg
tttgcggttgggaggtttactggggggataagagcagcagagcgtgagctgcctgttgtt
tacactgaggtggatggtgggttcaatgatggagggtttaatggtggtggtggtggtggt
ggtaataatgttccaaggaggatttcgtgggagacaagtatgagaagctcaagggagagt
ggcgggttgcgccgtgcgtttcgtagtttcttctcattctttgggaggcttagaattact
tcatcaacctcaaggtcaaggtctgagccgcaaaggagtcactctaatttagtgtttagt
cgatcgtggaggaggcggcagcgtggtcagccagcggctttggatgatgacagatggtaa
DBGET
integrated database retrieval system
