Quercus lobata (valley oak): 115952369
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Entry
115952369 CDS
T07350
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115952369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115952369
Enzymes [BR:
qlo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
115952369
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
90S particles
Other 90S particles
115952369
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Troponin
Motif
Other DBs
NCBI-GeneID:
115952369
NCBI-ProteinID:
XP_030925386
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All DBs
Position
7:complement(9816539..9820489)
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AA seq
283 aa
AA seq
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MVRRYAMKAGKKRKQREERYDREEEVAEQPVEDEAIAKKAMTERTSDGEEEEKKEEVNEL
EGIPIDPSDLKVANKPKVIFILERASLEVAKVGKTYQLLNSDDHAHFLLKNNRNPAEYRP
DIVHQALLMMLDSRLNKSGGLRAVYVRTEKGVLIEVKPHARLPRTFKRFSGLMLQVLQKL
STSAVGKREKLLRVIKNPVSRYLPVNSRKIGFSFSSEKLVDINKYVASASSDTDLVFVVG
AMAHGKIDKEYADDFISISGYPLSAAYCITMITNALETKYNIL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggcgttatgcgatgaaagcagggaagaagaggaagcagagagaagagaggtat
gacagagaagaagaagtagcagagcaaccagtggaagatgaagcaattgcaaagaaagct
atgacagagagaacaagtgatggtgaagaggaagaaaaaaaagaggaagtgaatgaactt
gagggcatcccaattgacccgagtgacctcaaagttgccaacaagcctaaagtcatcttc
attcttgaaagggcttctttggaagttgcaaaagttggaaagacttaccagctgttgaac
tcggatgaccatgcccatttcttgctgaaaaataacagaaatcctgctgaatacaggcct
gacattgttcatcaggctctcctaatgatgttggatagccgacttaataagagtgggggg
ttgcgagctgtctatgtgagaaccgagaaaggtgtccttattgaagttaaaccacatgct
cgccttccaaggacatttaagcggttctctggtctcatgttgcaggtgctacaaaaactg
agtactagtgctgttggtaagcgtgagaaacttttgcgtgtgattaagaatcctgtaagc
cggtatctacctgtcaactctcgcaaaataggattctcatttagttcagaaaaattggtt
gatataaacaaatatgtcgcatctgctagcagcgatactgaccttgtttttgtggttggt
gcgatggcccatgggaaaattgataaggagtacgcagatgattttatatcaatttctggt
taccctctgagtgccgcatactgtattacaatgattaccaatgctttggagacgaagtat
aatatattgtga
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