Quercus lobata (valley oak): 115952443
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Entry
115952443 CDS
T07350
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
qlo04141
Protein processing in endoplasmic reticulum
qlo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115952443
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115952443
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115952443
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115952443
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115952443
03009 Ribosome biogenesis [BR:
qlo03009
]
115952443
03110 Chaperones and folding catalysts [BR:
qlo03110
]
115952443
04131 Membrane trafficking [BR:
qlo04131
]
115952443
03051 Proteasome [BR:
qlo03051
]
115952443
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115952443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115952443
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
115952443
Spliceosome [BR:
qlo03041
]
Complex B
Other components
Prp19 complex
115952443
Complex C
Prp19-CDC5 complex
115952443
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115952443
Chaperones and folding catalysts [BR:
qlo03110
]
Heat shock proteins
HSP70 / DNAK
115952443
Membrane trafficking [BR:
qlo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
115952443
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
115952443
Proteasome [BR:
qlo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
115952443
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
115952443
Exosome [BR:
qlo04147
]
Exosomal proteins
Proteins found in most exosomes
115952443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
Motif
Other DBs
NCBI-GeneID:
115952443
NCBI-ProteinID:
XP_030925474
UniProt:
A0A7N2M597
LinkDB
All DBs
Position
7:47947260..47950419
Genome browser
AA seq
646 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRFSDASVQSDIKLWPFKVFNGPGEKPMICVNYKGEEKQFAA
EEISSMVLMKMREIAEAYLGFQIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTIHDAVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKK
KVETKNALENYAYNMRNTVKDEKIGAKLPPADKKKIEDAIEQAIQWLDSNQLAEADEFED
KMKELESICNPIIAKMYQGAGGEMPGADDDVPAGGSGAGPKIEEVD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaagggagaaggaccggcgatcggaatcgatctcggaaccacttactcctgc
gtcggagtatggcaacacgaccgtgttgagatcatagctaatgaccagggtaacagaacg
acgccgtcttacgtcgcatttaccgatacggagcgtttgatcggtgatgcggctaagaac
caggtcgccatgaaccctaccaacaccgtcttcgatgccaagaggttgattggacggaga
tttagtgatgcctcagttcagagtgatattaaattgtggccgttcaaggtctttaatgga
cctggcgagaagcccatgatttgtgtcaactacaagggtgaggagaagcaatttgctgct
gaagaaatctcatccatggttctaatgaagatgcgtgagatcgctgaggcttacctaggt
ttccaaatcaagaatgcagtggtcactgttccagcgtacttcaatgactctcagcgtcag
gctaccaaggatgccggtgtcattgctggtcttaatgtcatgcgaatcattaacgagccc
actgctgcggccattgcttatggtcttgataagaaggcaacaagtgtcggcgagaagaat
gttttgatttttgatcttggtggtggtacctttgatgtgtctcttcttactattgaagag
ggtatctttgaagtgaaagccactgctggtgacacccatcttggtggtgaagattttgat
aacagaatggtgaatcattttgtccaggagtttaagaggaagaacaagaaggacatcagt
ggcaaccccagagctcttaggagattgaggacctcatgtgagagggcaaagagaactctc
tcatccactgcccagactaccattgaaattgattctttgtatgaaggaattgatttctac
tccaccattactcgtgccagatttgaggagcttaacatggatctctttaggaagtgtatg
gaacctgtcgagaagtgtttgagagatgccaagatggacaagagcacaatccacgatgct
gtccttgtcggtggttcaactcgaattcccaaggtccagcagcttttacaagacttcttt
aacgggaaggagctctgcaagagcatcaaccctgatgaggccgttgcttatggtgctgca
gtccaggcagctattttgagcggtgagggcaatgagaaggtgcaggatcttctgctcttg
gatgttacccctctctcccttggtttggaaactgccggtggtgtcatgactgtgttgatt
cccaggaacactaccatccccacaaagaaggaacaggtgttctctacctattccgataac
cagcctggtgtgttgatccaggtctatgagggtgaaagaacaaggaccagggacaacaac
ttgcttggtaaatttgagctttcaggaatccctcctgctcccaggggtgttcctcaaatc
acagtgtgctttgacattgatgccaacggtatcttgaatgtgtctgctgaggacaagaca
accggtcaaaagaacaagatcaccattaccaatgacaagggtagactctcaaaggatgaa
atcgagaagatggttcaagaggcagagaaatacaagtctgaggatgaggagcacaaaaag
aaggtcgagaccaagaatgctttggagaattatgcatacaacatgaggaacacagtgaag
gatgagaagattggcgccaagcttccaccagctgataagaagaagatcgaggatgccatt
gagcaggcgatccaatggttagacagcaaccagcttgcagaggctgacgagtttgaagac
aagatgaaggagttggagagtatctgcaacccaatcattgccaagatgtaccaaggtgct
ggtggtgaaatgcccggagctgatgatgatgttcctgctggaggaagtggtgctggcccc
aagattgaggaagtcgactaa
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