Quercus lobata (valley oak): 115952465
Help
Entry
115952465 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115952465 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115952465
Membrane trafficking [BR:
qlo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115952465
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115952465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
WDR55
WD40
Beta-prop_WDR5
Synaptobrevin
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Lgl_C
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Galaxin_repeat
Motif
Other DBs
NCBI-GeneID:
115952465
NCBI-ProteinID:
XP_030925506
LinkDB
All DBs
Position
7:35239572..35251828
Genome browser
AA seq
1116 aa
AA seq
DB search
MLAAKRLIQKAVQHHQRKVQRGDLTTEDLDPRVAVHYGVPSTASVLAFDPIQRLLAIGTL
DGRIKVIGGDGIEGLLISPKQLPYKHIEFLQNKAYIVSISNDNDIQVWDLASRSIADSLQ
WASNITAFSVISGSHFMYVGDEHGLMSVIKFEAEDGKLFQLQYHISAGSISEAAGFPLPN
DQPIIGVLPQPCSSGNRVLLAYQNGLIILWDISEGQILFVGGGKDLQLKDGVVDSSSEVD
ANLPDATLEHHLEEKEISALCWASSNGSILAVGYIDGDILFWKTSCAASSKSQQASSSNN
IIKLQLSSAERRLPVIVLQWSKNQQSRNDCDGQLFIYGGDEIGSEEVLTVVSLEWSTGTL
RCVGRAELTLSGSFADMILLPNAGVMGGNQKADLFVLTNPGQLHFYDDASLSALISQRER
RPSISAMEFPAVVPSSNPSMTVAKLSKIPTGGDSSKALLEVASVMKLASTVTAVSAAKWP
LTGGLPSELSITKNDGVGRIYLGGYSDGSIRIWDATYPVLSLICLLEGEVQGVNVAGSSA
PVTKLDFCSISLRLAVGNGCGLVRLYDLKGCSDGTHFHFVTETKNEVYILPQGKGPQCRA
VFCLLNSPIQALQFANCGAKLAVGFESGRVAVLNTSSSSVLFWIDGVSCSSFPIISITWK
ELTYTHSLVKSPKHSETKVPAYSAEEVIFVLTKDAKINLFEGGTGKIISTQPWHLKKPSV
AISMYVIAVSISVSESSSEMQLESHEDSATKNEPMPNSTTVSINSHEGEQQPSSETACSE
ERLLDSILLLCCEDSLHLYSTKSVIQGNNKSIRKVKHAKPCCWTATLKKDEKVCGLVLLF
QTGVIEIRSLPDLELVKESSLMSILRWNFKANMDKTMSSSDNGQIALASGCELAFISLLA
GENDFRIPETLPCLHDEVLAAAADAALSFSLNPKNKQGTEPGILGGIIKGFKGRKVPHTE
DFIPNPKVNFSHLEGIFLKSPFSDSSPAVTDNQEAEELNIDDIEIDEPLPAASSSSHDFQ
NIKTEKGTERERLFQGGTDDTKPRLRTPEEIMATYRKAGDASSVAAHARDKLAQRQEKLE
KISRRTEELQSGAEDFASLANELVKTLEARKKWWHI
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgttagccgcgaagcgattgattcagaaagctgtgcaacaccatcagcgtaaagtgcaa
cgtggtgatttgacaacggaagacttggatccgcgggttgctgttcactatggtgttcca
tctacggcttcggttcttgctttcgaccccattcagcgccttttggccattgggactctg
gatgggagaattaaagttattggtggagatggtattgaaggacttctgatatccccaaag
caattgccttacaaacacatagagtttctacaaaacaaggcatatatagtcagcatttca
aatgacaatgatattcaggtttgggatcttgcgagcaggagtatagctgattctttacag
tgggcatccaatataactgctttttctgtgatcagtggctcccacttcatgtatgttggt
gatgagcatggtttgatgtctgtgataaagtttgaggctgaagatggaaaacttttccag
ttgcaatatcatatttctgcaggttctataagtgaagccgctgggttccctcttcctaat
gaccaacctatcattggagttcttcctcaaccgtgttcgtctgggaatagagtattgctt
gcatatcagaatggattgattattctttgggatatttctgaaggtcaaattctctttgtt
ggaggtggtaaggatctccaattgaaggatggagttgttgattcttcaagtgaagtggat
gctaatcttcccgatgctacattggaacatcatcttgaagagaaagagataagtgctctt
tgttgggcatcttccaatgggtccattctggctgtgggatacattgatggagatattttg
ttttggaaaacatcgtgtgctgcatctagtaaaagtcaacaagcttcatcatctaacaat
attattaagctacaattatcatctgcagaaaggagactccctgtcattgtcttacagtgg
tccaaaaaccaacaatcccgtaatgattgtgatggccaactttttatctatggcggtgat
gaaataggatctgaagaagttttgacggttgtatctcttgaatggtcaacggggacatta
agatgcgttggtcgtgcagagcttacacttagtggctctttcgcagacatgattttatta
ccaaatgctggggtgatggggggtaaccaaaaagctgatctctttgtgttgacaaaccct
gggcaattacatttctatgatgatgctagcctatctgccttaatatctcagcgtgagaga
agaccatccatctctgcgatggagtttcctgcagtggtaccatcatctaatccttccatg
actgtggcaaagctcagtaagatacccactgggggggactcatcaaaggctctgttagag
gtggcctcagttatgaaacttgcctcaacagtgactgcagttagtgctgccaagtggccc
ttgactggaggtttacccagtgaattgtctattactaaaaatgatggggttgggagaatt
tatttaggaggttattctgatgggtcaattcggatatgggatgccacgtatcctgtctta
tctttaatctgtcttttagaaggcgaggtacaaggtgtgaatgtggctggttcaagtgct
ccagtaacaaagttggacttctgctccatcagtttaaggttggctgttggcaacggatgt
ggtctggttcgtctctatgacctcaaaggctgttcagatgggacacatttccactttgtc
acagaaactaaaaatgaagtttacattttgcctcaaggaaaaggacctcaatgtagagct
gttttttgccttcttaattccccaatacaagcactacagtttgcaaattgtggagctaaa
cttgctgtgggatttgaatctggtcgtgttgcagtgctcaacacaagttcatcgtcagtt
ttgttctggatagatggtgtgtcttgctctagctttccaataatttcaattacttggaaa
gaacttacatatactcatagccttgtcaaaagccctaagcactctgaaacaaaagtccca
gcctactctgcagaggaagtaatatttgtattaaccaaggatgcaaagattaatttgttt
gaaggtggtactggtaaaattataagcactcagccatggcacttgaaaaagccatcagtt
gcaatttcaatgtatgttatagctgtcagtatctctgtctctgaatcatccagtgagatg
cagctggagtcccatgaggatagtgctaccaagaacgaacctatgcccaatagtactaca
gttagcataaattcacatgaaggtgaacaacagccctcttcagaaactgcatgttctgag
gaaagattgttggattcaattcttttgctttgttgtgaggattcattgcacttgtactct
acgaaatctgtgattcagggaaacaataaatccattcgtaaagtgaaacatgcaaaacct
tgctgttggacagcaactttaaagaaagatgaaaaagtttgtggactggtcttgctgttt
cagacaggtgtaattgaaatcagatccttgccagatttagaattggtgaaagaaagctcc
ttaatgtcaattttgaggtggaattttaaggcaaacatggacaagacgatgagctcttct
gataatgggcagattgcactggcaagtgggtgtgaattggcgttcatctctttattagct
ggtgaaaatgatttcaggattccagaaactttgccttgtctccatgatgaagttcttgca
gctgctgcagatgctgcccttagtttctctttaaatccgaagaataagcagggtactgaa
cctggcattctaggtggtatcatcaaaggttttaaagggagaaaagttccccatactgag
gattttattccaaatcctaaagtaaatttttctcatttagagggcatatttttgaagtcc
ccattctcagactcgtctccagctgttacagataatcaggaagctgaggagcttaatata
gatgacatcgagatagatgagcctctaccagcggcgtcttcttcatctcatgattttcaa
aatataaagacagagaaggggacagagagggaaagattatttcaaggggggactgatgat
accaaacccagacttagaacacctgaagaaatcatggctacatatagaaaagctggggac
gcttcttcggtggctgcacatgctagagacaagctcgcacagaggcaggaaaaattggag
aaaattagcaggcgcactgaagagctgcaaagtggagctgaagactttgcatcattggca
aatgagcttgtcaagaccctggaggcacgaaaaaaatggtggcatatatga
DBGET
integrated database retrieval system
