Quercus lobata (valley oak): 115952606
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Entry
115952606 CDS
T07350
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115952606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115952606
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
115952606
Prokaryotic type
Archaeal type
TFB
115952606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_8
WHD_GDS1
Motif
Other DBs
NCBI-GeneID:
115952606
NCBI-ProteinID:
XP_030925642
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All DBs
Position
7:2688050..2693550
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AA seq
312 aa
AA seq
DB search
MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGATGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVTKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPSWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgcgtattgctcagactgtaagcggcagacggaggtggtgttcgaccactcg
gccggcgacaccgtgtgttcggagtgcgggttggtgttggagtcgcactcgatcgacgag
acctccgagtggaggactttcgcaaacgaatcgggcgataacgacccggttcgtgtcggc
gggccgaccaacccgctcttggccgacggagggctctccaccgtcatagccaagcccaac
ggcgccaccggagagttcctctcctcctccctcggccgatggcagaatcgtggttccaac
cccgatcgcggcctcattctagcgttcaaaacgattgccactatgtccgataggctgggc
cttgttgcaaccattaaggaccgggctaatgagatatataagagggtggaagatcaaaag
tctagtagaggaagaaatcaggatgctctattggctgcttgtctgtacattgcttgtcga
caagaagacaaaccacgcactgtaaaggaaatatgctctgtcgctaatggagccacaaag
aaggaaattggccgagcaaaagaatacattgtgaaacaactggggttggagaatggtcag
tcggtggagatgggaacaatacatgctggggactttatgaggcggttttgttccaatctt
ggtatgaataatcaagcggttaaagctgcccaggaagctgttacaaaatcagaagagttt
gatataaggaggagccctatatcaattgcagcagcagttatttatattattactcagctt
tcggatgacaagaaacctctcaaagatatttcagttgccactggagttgcagaagggaca
ataagaaattcctacaaggatctttatccccatgtatcaaagataataccaagctggtat
gctaaggaggaggatctgaagaacctttgcagcccttga
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integrated database retrieval system
