Quercus lobata (valley oak): 115952653 Help Entry 115952653         CDS       T07350                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism qlo  Quercus lobata (valley oak) Pathway qlo03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:qlo00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     115952653  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:qlo03021]     115952653    03019 Messenger RNA biogenesis [BR:qlo03019]     115952653 Transcription machinery [BR:qlo03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      115952653 Messenger RNA biogenesis [BR:qlo03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      115952653     U7-dependent histone pre-mRNA processing factors      115952653 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-GeneID:  115952653 NCBI-ProteinID:  XP_030925701 LinkDB All DBs Position 7:complement(35623271..35639372) Genome browser AA seq 1167 aa AA seqDB search MLTYFVGKFAKFNISWLRGGHPILNVGDLSIEASQRLGLLLDQLRFPTVKSLSNSMIVVL INSLSTIAKQRPAFYGRILPVLLGLDPSSSVVNGMRVSAAKHALKNAFLTCLKCTHPGAA PWRDRLIGALRDMEAGGLTDQTIPEVCKINGSLGEGKEDSPVIKEEKPTIKSCDVVDVNL GSKRAGVPDSSDLAEDENVPGKRVRPTPSASEELTRESDKNNMMSHDDISSIGPTTSRGD GDNGPVQQLVAMFGALVAQGEKAVGSLEILISSISADLLAEVVMANMRHLPPNHSKGDGG EELLLNMTIVGSDSKAKYPPSFIADVLSLSSTFPPIASLLNAHRSESNDIVQKPCDEKED VVAEADSVLACDGLDHGSENALLPTDLPASSFVSSGMEKGCFPISSDIHDVGDLESEIPG LDSSAHADGLSETLVTSSMASTDLEEASQDQVTSLGQSTLKLLPSMSTEKSEELSPKAAV TDVSSLVSSTATSAGLSCNFVLPKMSAPVVYLDDEQKDYLQKMAFIRIVEAYRQVAVAGG SQVRFSLLAYLGVEFPSELDPWKLLQKHILEDYMGHEGHELTLRVLYRLYGEQAEDRDFF SSTTAASEYENFLLTVAETLRDSFPPSDKSLSRLLDEAPDLPKSVLKLLEDMCSPGNCDK AEDLQSGDRVTQGLSAVWRLIMLRPSIRDVCLKVALQSAVHHLEEVRMKAIRLVANKLYP ISSIAKQIEDFAKETLLSVISGDATERMDTEGSVTEMQKDSHLEKPVDEHPSVSVNSKDI SSDTHQSSTCQSVSSLSVSEVQRCMSLYFALCTKKHSLFRQIFIIYKSTSKTVKQAVHRQ IPILVRTMGSSSDLLEIISDPPSGSKNLLMQVLHTLTDGTIPSSELLFTIRKLYDSKLKD IEILIPVLPFLPKDEVKLIFPNVVNLPLDKFQAALARLLQGSSHSGPVLTPAEVLIAIHG IDPDKDEIPLKKVTDACNACFEQRQIFTQQVLAKVLNQLVEQIPLPLLFMRTVLQAIGAF PALVEFIMEILSRLVSKEIWKYPKLWVGFLKCALLTKPQSFGVLLKLPPAQLESALTRTA ALKAPLIAHASQPNIRSSLPRSVLVVLGLAPESQTSNLAQTGVAPDSQNSSQVQTSQAQT SQAQTGDTGNSDKEVLTEKSKESSGAS NT seq 3504 nt NT seq  +upstreamnt  +downstreamnt atgctgacctactttgtaggaaagtttgcaaaattcaacatttcttggcttcgtggtggt catccaatacttaatgttggagatttgtcaattgaggccagtcaacgtttgggtttattg cttgatcaactcaggtttccaacagtgaaatctcttagcaactcaatgatcgtagtgctt atcaatagcctttcaacaatcgcaaagcaaaggcctgcattttatggaaggattctgcct gttttacttggtttggatccctcgagctctgtagtcaatggaatgcgtgtttccgcagca aagcatgccctaaaaaatgccttcctcacctgcttgaaatgtacacacccgggtgctgca ccgtggcgggatcggttgattggtgccttgagggatatggaagctggagggttgactgac caaactattccggaagtgtgcaagattaatggaagtctaggggaagggaaagaagattca ccagttattaaggaagagaaacccacaattaaatcatgtgatgttgtggatgttaatttg gggagcaaaagagctggagtaccagacagcagtgatctggctgaagatgaaaatgtgcct ggaaagcgtgtcagaccaacacctagtgcctcagaggaattgactagagagtcggataag aataacatgatgtctcatgatgacatttcttcaattggaccaaccacttccagaggagat ggtgataatggacctgtgcagcaacttgtagctatgtttggcgccttggttgcacaaggt gaaaaagctgttggttctttagagattcttatctcaagcatctctgctgacttgttagca gaggtagtgatggctaatatgcgacaccttcctcccaatcattccaaaggtgatggaggt gaagagttgctgctaaacatgaccatagttggtagtgattctaaagctaaatatcctcca tcatttatagcagatgttctatcactttctagtactttcccaccaatagcttcactgtta aatgctcaccggtcagagtccaatgatatagtgcagaaaccttgtgatgagaaagaagat gttgtggctgaagctgatagtgttcttgcatgtgatggcttggaccatggatcggaaaat gcattgttgcccactgatttaccagcttcctcttttgtttcatctggaatggagaaaggc tgctttcctatttcatctgatattcatgatgtgggggatctagagagtgagatacctggc ctggattcttctgctcatgctgatggattgtcagagacgcttgttacatcctccatggcc tccactgacttagaagaagccagtcaagatcaagttacaagtttgggtcagtcaacactg aagttacttccatctatgtcaacagagaagtctgaggagctcagcccaaaagcagctgtt acagatgtcagcagcctggtctcatcaacagcaacttctgctggattgtcttgtaatttt gtcttgcccaagatgtcagcgcctgttgtttaccttgatgatgaacagaaggattatttg caaaaaatggctttcatccgtattgttgaggcatataggcaagttgcagtcgctggaggt tcacaagttcgcttttcactgcttgcatatttaggggttgagtttccctcagagttagac ccatggaagcttttacaaaagcatatcttggaagattatatgggtcatgagggacacgag ttgaccttgcgtgtcctctacaggttatatggcgagcaagcagaagatcgcgacttcttt tcttctacaactgcagcttctgaatatgaaaacttccttcttactgtggcagaaacgctt agagattcttttccaccttcagacaaatcattaagtagattgcttgatgaagctcctgat ctgcccaagtcagttttaaaattgttagaggacatgtgttctcctggaaactgtgataaa gctgaggatttacagagtggggatcgagtaactcaaggtctaagtgctgtgtggagattg attatgctgaggccttctattcgagatgtctgcttgaaagttgccttacagagcgcggtt catcatttggaggaagtgcgtatgaaggcaatacgactggtggcaaacaagctttatcca atatcatccattgctaaacaaattgaagattttgcaaaagaaacattgctctctgtaata agtggtgatgcaacagaaagaatggatactgaaggatcagtcactgaaatgcagaaggat tctcatctagaaaaacctgtggatgaacatccctcagtgagtgtgaacagtaaagatatt tcttctgatactcatcaatcgagcacatgtcagagtgtgtcctccctttcagtctccgag gtccagcggtgcatgtcactgtattttgccttatgtaccaagaagcactcccttttccgc caaatatttattatctataaaagcacatcaaagacagttaaacaggcagttcatcgccag atcccaatactcgtccgtactatgggctcgtcgtcggatcttcttgaaatcatttcagat cctccaagtggaagcaagaacctcctaatgcaggttttgcatacactgacggatgggacg attccctcttcagaactactttttaccattaggaagttatatgattccaaactaaaggat atagagattcttattccagtattaccgttcctaccaaaggatgaggttaagctgatattt cccaatgttgtgaatcttccactggataagttccaagcagcacttgctcgcttactacag ggttcatctcattctggtccagtgctcactccagctgaagttttgattgctatccatggg attgatcctgacaaagatgaaatccccttgaagaaggtcacagatgcatgcaatgcatgt tttgagcagaggcaaatattcacccaacaagtacttgcgaaggttttgaatcaattggtt gagcagattcctctccctttattgttcatgcggacagtattacaagctataggtgctttc ccagcgctggtggaatttataatggagatcctatctcgtcttgtcagcaaggagatttgg aaatatccaaagttgtgggtaggattcttgaagtgtgcactcttgacaaagcctcagtca tttggtgtattgcttaagttacctccagcacagctagaaagcgcattgaccagaactgca gctctgaaagcacctctgattgctcatgctagccaaccaaacatccgatcttcacttcca aggtctgtgttggtggttctgggacttgcacctgaatctcagacttcaaatctggcacaa actggagtagccccagattctcagaattcaagtcaggttcaaacaagtcaggctcaaaca agtcaggctcagactggagatacaggcaactcggataaggaggtgctgacagagaaatct aaagaatcatctggtgctagctga

DBGET integrated database retrieval system